RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 PRDM6Q9NQX0 595 aa15.14■□□□□ 0.01
COL16A1-203ENST00000373672 C17orf100A8MU93 164 aa15.14■□□□□ 0.01
COL16A1-203ENST00000373672 ZNF837Q96EG3 531 aaPredicted RBP15.14■□□□□ 0.01
COL16A1-203ENST00000373672 DPH3Q96FX2 82 aa15.14■□□□□ 0.01
COL16A1-203ENST00000373672 PARP14Q460N5 1801 aa15.14■□□□□ 0.01
COL16A1-203ENST00000373672 PSMG4Q5JS54 123 aa15.14■□□□□ 0.01
COL16A1-203ENST00000373672 UPK2O00526 184 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 CELA3BP08861 270 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 ZIC4Q8N9L1 334 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 SMAD7O15105 426 aaKnown RBP15.13■□□□□ 0.01
COL16A1-203ENST00000373672 TSPAN13O95857 204 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 LINC00271P0C7V0 271 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 SAA1P0DJI8 122 aaPredicted RBP15.13■□□□□ 0.01
COL16A1-203ENST00000373672 HOXA5P20719 270 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 SAA2-SAA4A0A096LPE2 208 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 SAA2P0DJI9 122 aaPredicted RBP15.13■□□□□ 0.01
COL16A1-203ENST00000373672 SAMD13Q5VXD3 122 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 MTURNQ8N3F0 131 aa15.13■□□□□ 0.01
COL16A1-203ENST00000373672 YPEL1O60688 119 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 RNASE4P34096 147 aaKnown RBP15.12■□□□□ 0.01
COL16A1-203ENST00000373672 ITLN2Q8WWU7 325 aaPredicted RBP15.12■□□□□ 0.01
COL16A1-203ENST00000373672 FAM168AQ92567 244 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 YPEL2Q96QA6 119 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 PTPRFP10586 1907 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 UMODP07911 640 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 TMEM144Q7Z5S9 345 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 FBLN5Q9UBX5 448 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 LHX2P50458 406 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 ORMDL3Q8N138 153 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 C9orf106Q8NAJ2 232 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 JKAMPQ9P055 326 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 WBP1Q96G27 269 aa15.12■□□□□ 0.01
COL16A1-203ENST00000373672 IGLV3-12A0A075B6K2 115 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 CCL1P22362 96 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 C14orf144Q96I85 54 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 OR4X2Q8NGF9 303 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
COL16A1-203ENST00000373672 C15orf61A6NNL5 157 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 NBR2O15453 112 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 MUC21A0A0G2JKD1 596 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 MUC21A0A140T8X8 626 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 MUC21Q5SSG8 566 aa15.11■□□□□ 0.01
COL16A1-203ENST00000373672 GATA2P23769 480 aaPredicted RBP15.1■□□□□ 0.01
COL16A1-203ENST00000373672 RPL23P62829 140 aaKnown RBP15.1■□□□□ 0.01
COL16A1-203ENST00000373672 ABHD17AQ96GS6 310 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 TUBA4BQ9H853 241 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 ZNF497Q6ZNH5 498 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 LYZL4Q96KX0 146 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 BTCP35070 178 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 PVRIGQ6DKI7 326 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 CEACAM1P13688 526 aa15.1■□□□□ 0.01
COL16A1-203ENST00000373672 VWCEQ96DN2 955 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 PEMTQ9UBM1 199 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.09■□□□□ 0.01
COL16A1-203ENST00000373672 SLC25A28Q96A46 364 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 RNF126Q9BV68 326 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 LOC102723996A0A087X1L8 192 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 IGLV3-32A0A0A0MS00 114 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 ZNF418Q8TF45 676 aaPredicted RBP15.09■□□□□ 0.01
COL16A1-203ENST00000373672 ZNF324BQ6AW86 544 aaPredicted RBP15.09■□□□□ 0.01
COL16A1-203ENST00000373672 LINC01587Q99440 93 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 SLC50A1Q9BRV3 221 aa15.09■□□□□ 0.01
COL16A1-203ENST00000373672 IGKV1D-13A0A0B4J2D9 117 aa15.08■□□□□ 0.01
COL16A1-203ENST00000373672 IGKV1-13P0DP09 117 aa15.08■□□□□ 0.01
COL16A1-203ENST00000373672 PTPRZ1P23471 2315 aaPredicted RBP15.08■□□□□ 0
COL16A1-203ENST00000373672 CCL20P78556 96 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 C7orf69Q9H7B7 122 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 GTF3AQ92664 365 aaKnown RBP15.08■□□□□ 0
COL16A1-203ENST00000373672 MORN2Q502X0 79 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 LYPD3O95274 346 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 TBX6O95947 436 aaPredicted RBP15.08■□□□□ 0
COL16A1-203ENST00000373672 LEPP41159 167 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 C10orf126Q8N4M7 172 aa15.08■□□□□ 0
COL16A1-203ENST00000373672 CCL3L1P16619 93 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 NR2C2APQ86WQ0 139 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 ST6GALNAC6Q969X2 333 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 ASCL2Q99929 193 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 SNAI2O43623 268 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 STAG3L3P0CL85 134 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 OR10J3Q5JRS4 329 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 ANKRD36A6QL64 1941 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 MPZP25189 248 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 GNG5P63218 68 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 TMEM170AQ8WVE7 144 aa15.07■□□□□ 0
COL16A1-203ENST00000373672 IGHV3OR16-8A0A075B7F1 116 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 NDUFA3O95167 84 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 FAM71F2Q6NXP2 309 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 FAM19A2Q8N3H0 131 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 RNASE6Q93091 150 aaKnown RBP15.06■□□□□ 0
COL16A1-203ENST00000373672 TMEM133Q9H2Q1 129 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 FAM90A9PA6NNJ1 464 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 FABP5P3A8MUU1 101 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 IGKV1-9A0A0C4DH69 117 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 DMRTA2Q96SC8 542 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 RNASE7Q9H1E1 156 aaKnown RBP15.06■□□□□ 0
COL16A1-203ENST00000373672 FAM89BQ8N5H3 189 aa15.06■□□□□ 0
COL16A1-203ENST00000373672 PRDM13Q9H4Q3 707 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms