RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PRR20CP86479 221 aa19.36■□□□□ 0.69
CDK9-201ENST00000373264 PRR20DP86480 221 aa19.36■□□□□ 0.69
CDK9-201ENST00000373264 PRR20BP86481 221 aa19.36■□□□□ 0.69
CDK9-201ENST00000373264 PRR20AP86496 221 aa19.36■□□□□ 0.69
CDK9-201ENST00000373264 H0YJW9 148 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 TMEM249Q2WGJ8 235 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 TMEM37Q8WXS4 190 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 TMEM106BQ9NUM4 274 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 A0A0U1RQK1 487 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 VENTXO95231 258 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 FAM87AP0C7U9 286 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 TBR1Q16650 682 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 OR2T10Q8NGZ9 312 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 RITA1Q96K30 269 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 GAL3ST2Q9H3Q3 398 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 FUT9Q9Y231 359 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 ABCA4P78363 2273 aa19.35■□□□□ 0.69
CDK9-201ENST00000373264 E7EQL1 145 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 IGHV2-70P01814 119 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 GAMTQ14353 236 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 DMRTC2Q8IXT2 367 aaPredicted RBP19.34■□□□□ 0.69
CDK9-201ENST00000373264 ANAPC16Q96DE5 110 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 DVL1O14640 695 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 RPL29P47914 159 aaKnown RBP19.34■□□□□ 0.69
CDK9-201ENST00000373264 SSBP2P81877 361 aaPredicted RBP19.34■□□□□ 0.69
CDK9-201ENST00000373264 OCC1Q8TAD7 63 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 RNASE6Q93091 150 aaKnown RBP19.34■□□□□ 0.69
CDK9-201ENST00000373264 HIST1H2BLQ99880 126 aa19.34■□□□□ 0.69
CDK9-201ENST00000373264 SHISA9B4DS77 424 aa19.33■□□□□ 0.69
CDK9-201ENST00000373264 LYNX1G3V0Z9 82 aa19.33■□□□□ 0.69
CDK9-201ENST00000373264 LYNX1P0DP58 116 aa19.33■□□□□ 0.69
CDK9-201ENST00000373264 SLC45A2Q9UMX9 530 aa19.33■□□□□ 0.69
CDK9-201ENST00000373264 ATRXP46100 2492 aa19.33■□□□□ 0.69
CDK9-201ENST00000373264 PLAUP00749 431 aa19.33■□□□□ 0.68
CDK9-201ENST00000373264 RNASE2P10153 161 aaKnown RBP19.33■□□□□ 0.68
CDK9-201ENST00000373264 OR10J1P30954 320 aa19.33■□□□□ 0.68
CDK9-201ENST00000373264 RHOBP62745 196 aa19.33■□□□□ 0.68
CDK9-201ENST00000373264 OR2T6Q8NHC8 308 aa19.33■□□□□ 0.68
CDK9-201ENST00000373264 ZNF257Q9Y2Q1 563 aa19.33■□□□□ 0.68
CDK9-201ENST00000373264 GGCTO75223 188 aaKnown RBP19.32■□□□□ 0.68
CDK9-201ENST00000373264 IL3RAP26951 378 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 NABP2Q9BQ15 211 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 TPSG1Q9NRR2 321 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 IGHV3-72A0A0B4J1Y9 119 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 TRAV20A0A0B4J274 112 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 HLA-DRB5Q30154 266 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 OR10X1Q8NGY0 326 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 SCNM1Q9BWG6 230 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 ZNF835Q9Y2P0 537 aa19.32■□□□□ 0.68
CDK9-201ENST00000373264 ELOA3CA0A087WX78 387 aaPredicted RBP19.31■□□□□ 0.68
CDK9-201ENST00000373264 F6UZH7 168 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 K7EN84 100 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 TNFRSF13BO14836 293 aaPredicted RBP19.31■□□□□ 0.68
CDK9-201ENST00000373264 LOXP28300 417 aaPredicted RBP19.31■□□□□ 0.68
CDK9-201ENST00000373264 ZNF503Q96F45 646 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 BET1LQ9NYM9 111 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 CGB1A6NKQ9 187 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 MORN5Q5VZ52 161 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 DYNLRB1Q9NP97 96 aa19.31■□□□□ 0.68
CDK9-201ENST00000373264 NDUFB3O43676 98 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 OR10J4P0C629 311 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 MEF2CQ06413 473 aaPredicted RBP19.3■□□□□ 0.68
CDK9-201ENST00000373264 RAB31Q13636 194 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 PSG5Q15238 335 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 OR5AN1Q8NGI8 311 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 SFRP2Q96HF1 295 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 XKRY2A2RUG3 117 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 PACRGQ96M98 296 aaPredicted RBP19.3■□□□□ 0.68
CDK9-201ENST00000373264 MALRD1Q5VYJ5 2156 aa19.3■□□□□ 0.68
CDK9-201ENST00000373264 A0A1B0GUS0 222 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 TGOLN2O43493 480 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 C9orf152Q5JTZ5 239 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 TMEM144Q7Z5S9 345 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 FLYWCH2Q96CP2 140 aaKnown RBP19.29■□□□□ 0.68
CDK9-201ENST00000373264 ACY3Q96HD9 319 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 PITPNC1Q9UKF7 332 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 SVEP1Q4LDE5 3571 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 SLC17A3O00476 420 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 APOA2P02652 100 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 REG1AP05451 166 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 GRNP28799 593 aaKnown RBP19.29■□□□□ 0.68
CDK9-201ENST00000373264 WT1-ASQ06250 92 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 SGMS2Q8NHU3 365 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 COMMD5Q9GZQ3 224 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 NDUFA4L2Q9NRX3 87 aa19.29■□□□□ 0.68
CDK9-201ENST00000373264 ZNF320A2RRD8 509 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 SRP14P37108 136 aaKnown RBP19.28■□□□□ 0.68
CDK9-201ENST00000373264 RPL8P62917 257 aaKnown RBP19.28■□□□□ 0.68
CDK9-201ENST00000373264 ACTL10Q5JWF8 245 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 C19orf35Q6ZS72 473 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 ABCA1O95477 2261 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 SNRPCP09234 159 aaKnown RBP19.28■□□□□ 0.68
CDK9-201ENST00000373264 APELAP0DMC3 54 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 LGALS4P56470 323 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 C2orf83Q53S99 150 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 RUSC1-AS1Q66K80 236 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 OSR1Q8TAX0 266 aaPredicted RBP19.28■□□□□ 0.68
CDK9-201ENST00000373264 LINC01560Q8TB33 94 aa19.28■□□□□ 0.68
CDK9-201ENST00000373264 TRAV5A0A0B4J249 113 aa19.27■□□□□ 0.68
CDK9-201ENST00000373264 OR5I1Q13606 314 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms