RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NIT1Q86X76 327 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 FABP6P51161 128 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 C1orf229Q6ZS94 237 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-202ENST00000372748 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
COL9A2-202ENST00000372748 TRBV9A0A0B4J1U6 114 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 C20orf202A1L168 122 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 CCL25O15444 150 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 GABRA6Q16445 453 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 CD177Q8N6Q3 437 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 DCHS1Q96JQ0 3298 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 HEATR1Q9H583 2144 aaKnown RBP12.17□□□□□ -0.46
COL9A2-202ENST00000372748 OR7C2O60412 319 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 CA2P00918 260 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 NPY1RP25929 384 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 GNG10P50151 68 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 PTTG1IPP53801 180 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 TIGITQ495A1 244 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 SLC24A4Q8NFF2 622 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 S1PR3Q99500 378 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 SSBP3Q9BWW4 388 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-202ENST00000372748 TNCP24821 2201 aa12.17□□□□□ -0.46
COL9A2-202ENST00000372748 PTPRBP23467 1997 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 MORN2Q502X0 79 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 OR10J3Q5JRS4 329 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 UNQ5815/PRO19632Q6UWF5 114 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
COL9A2-202ENST00000372748 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 CDC42EP3Q9UKI2 254 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 MT-ND6P03923 174 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 CCL11P51671 97 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 PRRX1P54821 245 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 ASCL3Q9NQ33 180 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 LY96Q9Y6Y9 160 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 BOD1L1Q8NFC6 3051 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 GGTLC3B5MD39 225 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 SLAQ13239 276 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 RAB31Q13636 194 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 IBA57Q5T440 356 aaKnown RBP12.16□□□□□ -0.46
COL9A2-202ENST00000372748 VWA1Q6PCB0 445 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 FAM168AQ92567 244 aa12.16□□□□□ -0.46
COL9A2-202ENST00000372748 TIMM8AO60220 97 aaPredicted RBP12.15□□□□□ -0.46
COL9A2-202ENST00000372748 ADH4P08319 380 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 AREGP15514 252 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 OR52E5Q8NH55 327 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 CLEC7AQ9BXN2 247 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 CEP250Q9BV73 2442 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.46
COL9A2-202ENST00000372748 NKX2-8O15522 239 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 LINC00869P0C866 280 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PRR20EP86478 221 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PRR20CP86479 221 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PRR20DP86480 221 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PRR20BP86481 221 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PRR20AP86496 221 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
COL9A2-202ENST00000372748 APCSP02743 223 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 FAM214BQ7L5A3 538 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 TP73-AS1Q9UF72 201 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 ICE1Q9Y2F5 2266 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 AMY1AP04745 511 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 PRDX2P32119 198 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 RPL19P84098 196 aaKnown RBP12.14□□□□□ -0.47
COL9A2-202ENST00000372748 MLANAQ16655 118 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF439Q8NDP4 499 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 IFI27L2Q9H2X8 130 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 CADP27708 2225 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 ZNF292O60281 2723 aa12.14□□□□□ -0.47
COL9A2-202ENST00000372748 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 USF1P22415 310 aaPredicted RBP12.13□□□□□ -0.47
COL9A2-202ENST00000372748 TSPOP30536 169 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 PLA2G2CQ5R387 149 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 OSTCQ9NRP0 149 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
COL9A2-202ENST00000372748 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 HOXC12P31275 282 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 Q56UQ5 140 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 Q6ZT83 130 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
COL9A2-202ENST00000372748 FAM90A9PA6NNJ1 464 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms