RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
SS18L1-202ENST00000370848 RANGRFQ9HD47 186 aaPredicted RBP11.59□□□□□ -0.55
SS18L1-202ENST00000370848 PPP5D1E7EU14 171 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 BMPR1BO00238 502 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 AKR1C4P17516 323 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 SUPT4H1P63272 117 aaKnown RBP11.58□□□□□ -0.56
SS18L1-202ENST00000370848 TMEM187Q14656 261 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 Q6ZRM9 215 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 HAPLN4Q86UW8 402 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 CCDC140Q96MF4 163 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
SS18L1-202ENST00000370848 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
SS18L1-202ENST00000370848 DNAH1Q9P2D7 4330 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
SS18L1-202ENST00000370848 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 CDS2O95674 445 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 HLA-AP01891 365 aaKnown RBP11.57□□□□□ -0.56
SS18L1-202ENST00000370848 MECP2P51608 486 aaKnown RBP11.57□□□□□ -0.56
SS18L1-202ENST00000370848 CCR6P51684 374 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 TMEM268Q5VZI3 342 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 THOC7Q6I9Y2 204 aaKnown RBP11.57□□□□□ -0.56
SS18L1-202ENST00000370848 TMED4Q7Z7H5 227 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
SS18L1-202ENST00000370848 FKBP11Q9NYL4 201 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 STARD9Q9P2P6 4700 aa11.57□□□□□ -0.56
SS18L1-202ENST00000370848 ST8SIA3O43173 380 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 SAP30O75446 220 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 B3GALNT1O75752 331 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 DHFRP00374 187 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 IL7P13232 177 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 ZP3P21754 424 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 INPP1P49441 399 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
SS18L1-202ENST00000370848 PRCDQ00LT1 54 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 DHODHQ02127 395 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
SS18L1-202ENST00000370848 ACSM6Q6P461 480 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 RBPMSQ93062 196 aaKnown RBP11.56□□□□□ -0.56
SS18L1-202ENST00000370848 GPR146Q96CH1 333 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 GALNT14Q96FL9 552 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 SCGB3A2Q96PL1 93 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
SS18L1-202ENST00000370848 F11RQ9Y624 299 aaKnown RBP11.56□□□□□ -0.56
SS18L1-202ENST00000370848 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
SS18L1-202ENST00000370848 BTCP35070 178 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 RPEL1Q2QD12 228 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 SLC25A24Q6NUK1 477 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 HSD17B13Q7Z5P4 300 aaPredicted RBP11.55□□□□□ -0.56
SS18L1-202ENST00000370848 OR2C3Q8N628 320 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
SS18L1-202ENST00000370848 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
SS18L1-202ENST00000370848 ATG12O94817 140 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 NXPH3O95157 252 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 EDN2P20800 178 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 IL34Q6ZMJ4 242 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 SLC35G3Q8N808 338 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 DEDD2Q8WXF8 326 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 CACNG5Q9UF02 275 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 FLVCR2Q9UPI3 526 aa11.54□□□□□ -0.56
SS18L1-202ENST00000370848 A8MZ25 164 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 OR2C1O95371 312 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 IFNA17P01571 189 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 GPR183P32249 361 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 ARL3P36405 182 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 SBSPONQ8IVN8 264 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 MUC7Q8TAX7 377 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 ZNF502Q8TBZ5 544 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 SLC25A21Q9BQT8 299 aaPredicted RBP11.53□□□□□ -0.56
SS18L1-202ENST00000370848 KCNIP3Q9Y2W7 256 aa11.53□□□□□ -0.56
SS18L1-202ENST00000370848 K7EIM0 57 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 PLA2G10O15496 165 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 HOXA1P49639 335 aaPredicted RBP11.52□□□□□ -0.57
SS18L1-202ENST00000370848 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 RBMS2Q15434 407 aaKnown RBP11.52□□□□□ -0.57
SS18L1-202ENST00000370848 CASC10Q5T4H9 136 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 IL22RA2Q969J5 263 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 ASCL2Q99929 193 aa11.52□□□□□ -0.57
SS18L1-202ENST00000370848 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 NAP1L6A6NFF2 107 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
SS18L1-202ENST00000370848 GGCTO75223 188 aaKnown RBP11.51□□□□□ -0.57
SS18L1-202ENST00000370848 NDUFB6O95139 128 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 CLEC3BP05452 202 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 CSN3P07498 182 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 GP9P14770 177 aa11.51□□□□□ -0.57
SS18L1-202ENST00000370848 SPNP16150 400 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms