RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MAGT1Q9H0U3 335 aa12.12□□□□□ -0.47
LMO4-201ENST00000370542 OR51I2Q9H344 312 aa12.12□□□□□ -0.47
LMO4-201ENST00000370542 C1RLQ9NZP8 487 aa12.12□□□□□ -0.47
LMO4-201ENST00000370542 KIR2DL5BA0A0G2JN68 375 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 KIR2DL5BA0A0G2JPC4 375 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 TMEM210A6NLX4 147 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
LMO4-201ENST00000370542 OMGP23515 440 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 PSMB3P49720 205 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 COL10A1Q03692 680 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 RUSC1-AS1Q66K80 236 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 KIR2DL5AQ8N109 375 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 WFDC12Q8WWY7 111 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 GPR173Q9NS66 373 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 MPC1Q9Y5U8 109 aa12.11□□□□□ -0.47
LMO4-201ENST00000370542 FAM90A26D6RGX4 464 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 CHST1O43916 411 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 TUSC2O75896 110 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
LMO4-201ENST00000370542 ARF6P62330 175 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 PAX5Q02548 391 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 LRRC75BQ2VPJ9 315 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 STUMQ69YW2 141 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 C16orf82Q7Z2V1 217 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 LINC00596Q86U02 117 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 MRPL41Q8IXM3 137 aaKnown RBP12.1□□□□□ -0.47
LMO4-201ENST00000370542 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 OR4F5Q8NH21 305 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 LRRC29Q8WV35 223 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 DYRK2Q92630 601 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 GAB2Q9UQC2 676 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 ST3GAL6Q9Y274 331 aa12.1□□□□□ -0.47
LMO4-201ENST00000370542 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 IGHV3OR15-7A0A075B7D8 119 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CDIPTO14735 213 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CST7O76096 145 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 NRASP01111 189 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
LMO4-201ENST00000370542 IER3P46695 156 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 PAFAH1B2P68402 229 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 MEF2BQ02080 365 aaPredicted RBP12.09□□□□□ -0.47
LMO4-201ENST00000370542 SPIN3Q5JUX0 258 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 DUX4L9Q6RFH8 374 aaPredicted RBP12.09□□□□□ -0.47
LMO4-201ENST00000370542 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 FGFRL1Q8N441 504 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 PLPPR1Q8TBJ4 325 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 OR5P3Q8WZ94 311 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 LHX4Q969G2 390 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CCL13Q99616 98 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CITED1Q99966 193 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
LMO4-201ENST00000370542 RPRMQ9NS64 109 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 OR6C3Q9NZP0 311 aa12.09□□□□□ -0.47
LMO4-201ENST00000370542 CLPSL1A2RUU4 121 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 ZNF737O75373 536 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
LMO4-201ENST00000370542 PAX9P55771 341 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 ADIRFQ15847 76 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 FBLN7Q53RD9 439 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 CXorf66Q5JRM2 361 aaPredicted RBP12.08□□□□□ -0.48
LMO4-201ENST00000370542 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 TXNDC17Q9BRA2 123 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 DCTN5Q9BTE1 182 aa12.08□□□□□ -0.48
LMO4-201ENST00000370542 TRBV6-6A0A0A6YYG2 114 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 A0A0U1RQK1 487 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 ZNF816-ZNF321PA0A0X1KG74 233 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 RUNX1Q01196 453 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 VMO1Q7Z5L0 202 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 TMEM217Q8N7C4 229 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 Q8N7P7 452 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 TNFRSF14Q92956 283 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 C20orf144Q9BQM9 153 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 RTL8AQ9BWD3 113 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
LMO4-201ENST00000370542 CTXND1A0A1B0GTU2 59 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 DLEU1O43261 78 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 IGHV4-59P01825 116 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 F2RP25116 425 aa12.06□□□□□ -0.48
LMO4-201ENST00000370542 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
LMO4-201ENST00000370542 ARL6IP6Q8N6S5 226 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms