RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ICAM4Q14773 271 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 FOXA3P55318 350 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 SLC25A47Q6Q0C1 308 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 KLF14Q8TD94 323 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 IGHV3-23P01764 117 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 FOXL2P58012 376 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 NPIPB11E5RHQ5 1161 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 NGFRP08138 427 aa10.62□□□□□ -0.71
HCFC1-202ENST00000369984 RSPO3Q9BXY4 272 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-202ENST00000369984 DNM1P46Q6ZS02 220 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 NPCDR1Q9BY65 106 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 TMPRSS3P57727 454 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 Q96M66 194 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 TMEM106BQ9NUM4 274 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 PRR32B1ATL7 298 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 VENTXO95231 258 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 TMEM86BQ8N661 226 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-202ENST00000369984 TCF19Q9Y242 345 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 C1orf122Q6ZSJ8 110 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 OR11H4Q8NGC9 324 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 NPIPB3Q92617 1050 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 PQLC2LA1A4F0 135 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 FUT5Q11128 374 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 C2orf68Q2NKX9 166 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 IGKV1-8A0A0C4DH67 115 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 RNASE4P34096 147 aaKnown RBP10.61□□□□□ -0.71
HCFC1-202ENST00000369984 CD69Q07108 199 aa10.61□□□□□ -0.71
HCFC1-202ENST00000369984 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
HCFC1-202ENST00000369984 A0A1B0GUT8 65 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 NAPSAO96009 420 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 OCIAD2Q56VL3 154 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 SPAARA0A1B0GVQ0 90 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 PATE3B3GLJ2 98 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 CD160O95971 181 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 TMEM186Q96B77 213 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 SCARF2Q96GP6 870 aaPredicted RBP10.6□□□□□ -0.71
HCFC1-202ENST00000369984 AMELYQ99218 206 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 NPIPB4C9JG80 1138 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 CGAP01215 116 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 FAM89BQ8N5H3 189 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 TDGF1P3P51864 188 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 C5orf30Q96GV9 206 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 TNCP24821 2201 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
HCFC1-202ENST00000369984 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 ASPHD2Q6ICH7 369 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 FAM19A2Q8N3H0 131 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 SLC25A38Q96DW6 304 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 G6PC2Q9NQR9 355 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
HCFC1-202ENST00000369984 SLC22A18ASQ8N1D0 253 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 POC1AQ8NBT0 407 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 ZNF501Q96CX3 271 aaPredicted RBP10.59□□□□□ -0.71
HCFC1-202ENST00000369984 CYSLTR1Q9Y271 337 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 TRBV5-7A0A0A0MS05 114 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 TRAV24A0A0B4J272 114 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 GREB1LQ9C091 1923 aaPredicted RBP10.59□□□□□ -0.71
HCFC1-202ENST00000369984 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 TMEM74BQ9NUR3 256 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 MUC21A0A0G2JKD1 596 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 MUC21A0A140T8X8 626 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 CA7P43166 264 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 S100A7L2Q5SY68 101 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 DRAM1Q8N682 238 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 LRTM2Q8N967 370 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 OR9G1Q8NH87 305 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 WDYHV1Q96HA8 205 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 IMMP2LQ96T52 175 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 HIGD1CA8MV81 97 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 LEPP41159 167 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 TSPAN7P41732 249 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 EFNB1P98172 346 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 C1orf100Q5SVJ3 147 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 PLSCR4Q9NRQ2 329 aa10.59□□□□□ -0.71
HCFC1-202ENST00000369984 SCN10AQ9Y5Y9 1956 aa10.58□□□□□ -0.71
HCFC1-202ENST00000369984 COL11A2P13942 1736 aaPredicted RBP10.58□□□□□ -0.72
HCFC1-202ENST00000369984 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 F8WEM9 126 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 FBLIM1Q8WUP2 373 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 TRGV3P03979 118 aa10.58□□□□□ -0.72
HCFC1-202ENST00000369984 RPL39P5Q59GN2 51 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms