RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 KLRD1Q13241 179 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 VAX1Q5SQQ9 334 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 BCDIN3DQ7Z5W3 292 aaKnown RBP4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR2L13Q8N349 312 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR2K2Q8NGT1 345 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR6K6Q8NGW6 343 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 SLC37A2Q8TED4 501 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 SSMEM1Q8WWF3 244 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 FBXL15Q9H469 300 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM30AQ9NV96 361 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 PRNDQ9UKY0 176 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 NINQ8N4C6 2090 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TRAV8-6A0A0B4J262 113 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 LOC102725191A0A1B0GVB3 256 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 MEIS3P1A6NDR6 274 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE7O76087 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 SOX14O95416 240 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 CRYGDP07320 174 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 CELA2AP08217 269 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF708P17019 499 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 EVI2AP22794 236 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 HTR1DP28221 377 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF93P35789 620 aaPredicted RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 CDKN2AP42771 156 aaKnown RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF83P51522 516 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 LIM2P55344 173 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TGFBR3Q03167 851 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF117Q03924 483 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GAGE4Q13068 117 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 FAM53BQ14153 422 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GLYATL3Q5SZD4 288 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZFAND6Q6FIF0 208 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 CLDN19Q8N6F1 224 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GCSAMQ8N6F7 178 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM178AQ8NBL3 297 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 OR13A1Q8NGR1 328 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 OR5H2Q8NGV7 314 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF563Q8TA94 476 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 KLK6Q92876 244 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 NUS1Q96E22 293 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ABHD14BQ96IU4 210 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 AP1S3Q96PC3 154 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GPER1Q99527 375 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 EBPLQ9BY08 206 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ISG20L2Q9H9L3 353 aaKnown RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 RABAC1Q9UI14 185 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 VDAC3Q9Y277 283 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TRAPPC1Q9Y5R8 145 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 IER3IP1Q9Y5U9 82 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 C2CD3Q4AC94 2353 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 NUMA1Q14980 2115 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 DOCK9Q9BZ29 2069 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 MED13Q9UHV7 2174 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TRAV36DV7A0A075B6V5 113 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 DPRXA6NFQ7 191 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 SH2D1BO14796 132 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 EDNRAP25101 427 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 PPP1CCP36873 323 aaKnown RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 CD164Q04900 197 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
UBE3D-202ENST00000369746 FAM27D1Q5T7N8 215 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 Q6Q795 121 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM64Q6YI46 380 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 C16orf82Q7Z2V1 217 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 LRP11Q86VZ4 500 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 VSTM2AQ8TAG5 236 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 OR51E1Q8TCB6 317 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 RNF128Q8TEB7 428 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 RARRES2Q99969 163 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 GGTLC1Q9BX51 225 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 HES7Q9BYE0 225 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 OR2D2Q9H210 308 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 PRR13Q9NZ81 148 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 ANAPC10Q9UM13 185 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 PIKFYVEQ9Y2I7 2098 aa4.17□□□□□ -1.74
UBE3D-202ENST00000369746 A0A1B0GX51 115 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 H7C1C5 153 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 KBTBD11O94819 623 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 KRASP01116 189 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 MT-ND6P03923 174 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OR9G9P0C7N8 305 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF728P0DKX0 622 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 BCL2P10415 239 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 SRD5A1P18405 259 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 PPIFP30405 207 aaKnown RBP4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OPRM1P35372 400 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF260Q3ZCT1 412 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 PRR30Q53SZ7 412 aaPredicted RBP4.16□□□□□ -1.74
UBE3D-202ENST00000369746 MMD2Q8IY49 270 aa4.16□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF433Q8N7K0 673 aaPredicted RBP4.16□□□□□ -1.74
UBE3D-202ENST00000369746 OR2G3Q8NGZ4 309 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms