RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 HIST1H2BHQ93079 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 GAFA1Q96PS6 74 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BNQ99877 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIST1H2BMQ99879 126 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 NABP2Q9BQ15 211 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 BET1LQ9NYM9 111 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 VENTXO95231 258 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 GCGP01275 180 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 RPLP1P05386 114 aaKnown RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 THBDP07204 575 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 SAA1P0DJI8 122 aaPredicted RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 PRCDQ00LT1 54 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 UNQ6494/PRO21346Q6UXR6 183 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM144Q7Z5S9 345 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 CHODLQ9H9P2 273 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 WFDC1Q9HC57 220 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 HIF1ANQ9NWT6 349 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 GOLT1BQ9Y3E0 138 aa4.4□□□□□ -1.7
SMNDC1-202ENST00000369603 TRAV1-1A0A0B4J248 108 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 M0QZK8 103 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 NDUFB4O95168 129 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 IL6RP08887 468 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 ARL14EPLP0DKL9 152 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 SRP14P37108 136 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 HNRNPA3P51991 378 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 MFAP4P55083 255 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 ATP5J2P56134 94 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 RPL30P62888 115 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 GFI1BQ5VTD9 330 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 FAM71F2Q6NXP2 309 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM14EPQ6UXP3 125 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 OR8I2Q8N0Y5 310 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 RPRMLQ8N4K4 120 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TEX45Q8NA69 505 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 OR5AU1Q8NGC0 362 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 OR51G1Q8NGK1 321 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TBX15Q96SF7 602 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 COL25A1Q9BXS0 654 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 WDR83OSQ9Y284 106 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 PAM16Q9Y3D7 125 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 SPTBN1Q01082 2364 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 FREM1Q5H8C1 2179 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM8BA6NDV4 472 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 CGAP01215 116 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 CLEC3BP05452 202 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 HIST1H1EP10412 219 aaKnown RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 SELLP14151 372 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 PMCHP20382 165 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 GCHFRP30047 84 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 NHLH1Q02575 133 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 OR5I1Q13606 314 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM183AQ8IXX5 376 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 MBD3L1Q8WWY6 194 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 NPIPB3Q92617 1050 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 NAT8BQ9UHF3 227 aa4.4□□□□□ -1.71
SMNDC1-202ENST00000369603 INTS1Q8N201 2190 aaKnown RBP4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 COL4A2P08572 1712 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 A0A1B0GW64 132 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CD55P08174 381 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 OR9G9P0C7N8 305 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 APELAP0DMC3 54 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CCL20P78556 96 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 FXYD3Q14802 87 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 ELOBQ15370 118 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 TMEM200BQ69YZ2 307 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 TEX29Q8N6K0 151 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CLDND2Q8NHS1 167 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CCL19Q99731 98 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 DKK4Q9UBT3 224 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 A0A087WWC5 75 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 FCN1O00602 326 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 SPINK4O60575 86 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CRISP2P16562 243 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 TFF3Q07654 80 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 LY6DQ14210 128 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 VAMP3Q15836 100 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 SLC25A48Q6ZT89 311 aaKnown RBP4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 OR5R1Q8NH85 324 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 RBM14Q96PK6 669 aaKnown RBP4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 PARLQ9H300 379 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 LIME1Q9H400 295 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CRIM1Q9NZV1 1036 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 DNAH12Q6ZR08 3092 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 KIAA1324LA8MWY0 1029 aaPredicted RBP4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 MOSP00540 346 aa4.39□□□□□ -1.71
SMNDC1-202ENST00000369603 CXCL1P09341 107 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms