RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 GPM6AP51674 278 aa12.88□□□□□ -0.35
SEMA6C-202ENST00000368912 TBR1Q16650 682 aa12.88□□□□□ -0.35
SEMA6C-202ENST00000368912 MDP1Q86V88 176 aa12.88□□□□□ -0.35
SEMA6C-202ENST00000368912 RBMXL3Q8N7X1 1067 aaKnown RBP12.88□□□□□ -0.35
SEMA6C-202ENST00000368912 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
SEMA6C-202ENST00000368912 M0R1B8 84 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 WNT2P09544 360 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 NPFFR1Q9GZQ6 430 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 IGKV1D-8A0A087WSZ0 117 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 C11orf94C9JXX5 98 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 OR2H1Q9GZK4 316 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 ST20Q9HBF5 79 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 NCKAP5O14513 1909 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 GRPP07492 148 aa12.87□□□□□ -0.35
SEMA6C-202ENST00000368912 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 PLA2G5P39877 138 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 YPEL3P61236 119 aaPredicted RBP12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 PCBD1P61457 104 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 SNRNP40Q96DI7 357 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 LRRK2Q5S007 2527 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 GRB2P62993 217 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 MALLQ13021 153 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 IAPPP10997 89 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 UBE2G1P62253 170 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 FOXL1Q12952 345 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 C6orf201Q7Z4U5 140 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 CCDC71LQ8N9Z2 235 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 UBALD1Q8TB05 177 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 WNK2Q9Y3S1 2297 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 KALRNO60229 2985 aa12.86□□□□□ -0.35
SEMA6C-202ENST00000368912 IGFBP2P18065 325 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 TCL1AP56279 114 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 FAM27E3Q08E93 113 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 FAM214BQ7L5A3 538 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 MBD3L1Q8WWY6 194 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 OBP2BQ9NPH6 170 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 K7EP34 96 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 VENTXO95231 258 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 CRYGCP07315 174 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 Q0VG73 95 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 RNF138Q8WVD3 245 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 RNF183Q96D59 192 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 GPHA2Q96T91 129 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 TMEM14DPA8MWL7 114 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 IGHMP01871 453 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 MSRB2Q9Y3D2 182 aa12.85□□□□□ -0.35
SEMA6C-202ENST00000368912 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 SLC25A6P12236 298 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 GPR183P32249 361 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 NPBWR2P48146 333 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 CA6P23280 308 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 NRN1LQ496H8 165 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 SSTR5P35346 364 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 TMPRSS3P57727 454 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 HOXA4Q00056 320 aaPredicted RBP12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 MRPL54Q6P161 138 aaKnown RBP12.84□□□□□ -0.35
SEMA6C-202ENST00000368912 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 TMEM54Q969K7 222 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 ZNF488Q96MN9 340 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 ANAPC13Q9BS18 74 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 PNRC2Q9NPJ4 139 aaKnown RBP12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 A6NDN8 102 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 FABP2P12104 132 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 ROM1Q03395 351 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 OR8B2Q96RD0 313 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 OR7C1O76099 320 aaPredicted RBP12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 TMEM50AO95807 157 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 NAPSAO96009 420 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
SEMA6C-202ENST00000368912 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
SEMA6C-202ENST00000368912 TCTAP57738 103 aa12.82□□□□□ -0.36
SEMA6C-202ENST00000368912 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms