RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TMEM177Q53S58 311 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 SSX8Q7RTT4 187 aa11.65□□□□□ -0.54
CD48-201ENST00000368045 A0A1W2PN81 502 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 HELTA6NFD8 242 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 DLL1O00548 723 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 OR4A8P0C604 315 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 RAB4BP61018 213 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 FAM27E3Q08E93 113 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 HLA-DRB5Q30154 266 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 OR5AN1Q8NGI8 311 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 OSTCQ9NRP0 149 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 V9GYV3 84 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 BDP1A6H8Y1 2624 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 H0YJW9 148 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 ACTL6BO94805 426 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 C8orf88P0DMB2 117 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 NDUFB7P17568 137 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 HNF1AP20823 631 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
CD48-201ENST00000368045 SSTP61278 116 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 ERHP84090 104 aaKnown RBP11.64□□□□□ -0.55
CD48-201ENST00000368045 TIGITQ495A1 244 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 CENPWQ5EE01 88 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
CD48-201ENST00000368045 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 ZNF714Q96N38 554 aa11.64□□□□□ -0.55
CD48-201ENST00000368045 MRPL20Q9BYC9 149 aaKnown RBP11.64□□□□□ -0.55
CD48-201ENST00000368045 TET2Q6N021 2002 aaPredicted RBP11.63□□□□□ -0.55
CD48-201ENST00000368045 HEATR1Q9H583 2144 aaKnown RBP11.63□□□□□ -0.55
CD48-201ENST00000368045 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 MT-ND6P03923 174 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 TPPP2P59282 170 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 ERVFC1-1P60608 527 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
CD48-201ENST00000368045 WDR73Q6P4I2 378 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 MMD2Q8IY49 270 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 OR1L6Q8NGR2 347 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 ZNF503Q96F45 646 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 HARBI1Q96MB7 349 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 COMMD5Q9GZQ3 224 aa11.63□□□□□ -0.55
CD48-201ENST00000368045 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
CD48-201ENST00000368045 COL6A3P12111 3177 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 SLC17A3O00476 420 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 OR7C2O60412 319 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 CRISP2P16562 243 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 CRYBB3P26998 211 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
CD48-201ENST00000368045 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 LINC00311Q8N616 119 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 SLC25A33Q9BSK2 321 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 C16orf97H3BN30 126 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 ISLRO14498 428 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 CBLN1P23435 193 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 Q0VG73 95 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
CD48-201ENST00000368045 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
CD48-201ENST00000368045 GGTLC3B5MD39 225 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 SCGB1D1O95968 90 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
CD48-201ENST00000368045 TAS2R60P59551 318 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 ADIPOQQ15848 244 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 C1orf194Q5T5A4 169 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 C22orf34Q6ZV56 151 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 MOB3BQ86TA1 216 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 OR4C13Q8NGP0 309 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 RND1Q92730 232 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 FAM122AQ96E09 287 aa11.61□□□□□ -0.55
CD48-201ENST00000368045 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 FCN1O00602 326 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 DSCAMO60469 2012 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 PPOXP50336 477 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 CX3CL1P78423 397 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 CCL8P80075 99 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
CD48-201ENST00000368045 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
CD48-201ENST00000368045 PPIAL4EA0A075B759 164 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 VSTM5A8MXK1 200 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 PPIAL4DF5H284 164 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 TMEM178BH3BS89 294 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 PPIAL4FP0DN26 164 aa11.59□□□□□ -0.55
CD48-201ENST00000368045 TMEM200BQ69YZ2 307 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms