RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 CTGFP29279 349 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 SYNGR3O43761 229 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 NDUFS6O75380 124 aaKnown RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 DUX3Q96PT4 197 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 PLSCR4Q9NRQ2 329 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 SMIM8Q96KF7 97 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 ZG16O60844 167 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 IDI2-AS1Q9NZ38 188 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 PPIAL4CA0A0B4J2A2 164 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
SRGAP3-201ENST00000360413 NAPSAO96009 420 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 COX14Q96I36 57 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 RTN4RL2Q86UN3 420 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 CIARTQ8N365 385 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 IGHV5-10-1A0A0J9YXX1 117 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 HSPE1P61604 102 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 ZP4Q12836 540 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 SORL1Q92673 2214 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 H3BTX0 84 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 PEX7O00628 323 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 LEPP41159 167 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 ZNF479Q96JC4 524 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 JPT1Q9UK76 154 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 ZIC3O60481 467 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BLQ99880 126 aa11.28□□□□□ -0.6
SRGAP3-201ENST00000360413 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 F8WEM9 126 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 NR2C2APQ86WQ0 139 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 ZPLD1Q8TCW7 415 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 MYF5P13349 255 aa11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 MORN3Q6PF18 240 aaPredicted RBP11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 C1orf162Q8NEQ5 155 aaPredicted RBP11.27□□□□□ -0.6
SRGAP3-201ENST00000360413 RND2P52198 227 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 HIST1H4AP62805 103 aaKnown RBP11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 LGALS1P09382 135 aaKnown RBP11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 ZNF708P17019 499 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 ORMDL3Q8N138 153 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 NEU4Q8WWR8 484 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 ZNF818PQ6ZRF7 136 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
SRGAP3-201ENST00000360413 IFI6P09912 130 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 CCL8P80075 99 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 LINC00305Q7Z4B0 112 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 TTTY12Q9BZ98 90 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 PEX11BO96011 259 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 TRBV5-3A0A0A0MS03 114 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 PRTN3P24158 256 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 TMEM187Q14656 261 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 TNFRSF6BO95407 300 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 ZP1P60852 638 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 FBLIM1Q8WUP2 373 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 PTPRFP10586 1907 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 LINC01465Q8N7H1 131 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 DENND4AQ7Z401 1863 aa11.26□□□□□ -0.61
SRGAP3-201ENST00000360413 TRBV5-5A0A0J9YX44 114 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 PMS2CLQ68D20 193 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 ARPC1AQ92747 370 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 BGLAPP02818 100 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 HSD52Q0P140 79 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 ASCL2Q99929 193 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 REG1AP05451 166 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 UBE2V1Q13404 147 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms