RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 VDAC1P21796 283 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 S100GP29377 79 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 ARL3P36405 182 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 DVL1P1P54792 670 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 PAX5Q02548 391 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 AKR1C1Q04828 323 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 RAB31Q13636 194 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 DIAPH2-AS1Q14236 149 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 FBXL19-AS1Q494R0 122 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 TEX36Q5VZQ5 186 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 S100A7AQ86SG5 101 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 ODF3L1Q8IXM7 274 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 OR1L6Q8NGR2 347 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 PPP1R35Q8TAP8 253 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 AQP10Q96PS8 301 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BLQ99880 126 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 C20orf144Q9BQM9 153 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SH3BGRL3Q9H299 93 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 IFI27L2Q9H2X8 130 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 TNFRSF18Q9Y5U5 241 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 ANKRD17O75179 2603 aaKnown RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 TRAV3A0A0B4J244 114 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 TRAV38-1A0A0B4J264 116 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 KBTBD11-OT1A0A1B0GTJ5 212 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 hCG_1809904A0A1W2PP81 198 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 A0A1W2PPE2 198 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 A0A1W2PR64 198 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 A6NNC1 897 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 B9A039 149 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 RNASEK-C17orf49H0YIS7 233 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 CD55P08174 381 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 PET100P0DJ07 73 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SAA2P0DJI9 122 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 CGB3P0DN86 165 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 CGB7P0DN87 165 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 MYOD1P15172 320 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 GZMHP20718 246 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 RPS10P46783 165 aaKnown RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SSBP2P81877 361 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 EIF4EBP1Q13541 118 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 TMEM200BQ69YZ2 307 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 FAM24BQ8N5W8 94 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SLC25A31Q9H0C2 315 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 SMDT1Q9H4I9 107 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 PLEKHF2Q9H8W4 249 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 CBLN4Q9NTU7 201 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 LIN7CQ9NUP9 197 aaKnown RBP4.17□□□□□ -1.74
ATXN3-202ENST00000359366 HIF1ANQ9NWT6 349 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 OR6C3Q9NZP0 311 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 CLN8Q9UBY8 286 aa4.17□□□□□ -1.74
ATXN3-202ENST00000359366 LOC105371242A0A075B767 164 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 A0A087WWC5 75 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 OR11H12B2RN74 326 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 E5RGE8 158 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BKO60814 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ARG1P05089 322 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BJP06899 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TPT1P13693 172 aaKnown RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BOP23527 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 OR10J1P30954 320 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BBP33778 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 RPL29P47914 159 aaKnown RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 SULT1A1P50225 295 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 PPOXP50336 477 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 CRYBA4P53673 196 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 PAX9P55771 341 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BDP58876 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BCP62807 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 SRPXP78539 464 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 EWSR1Q01844 656 aaKnown RBP eCLIP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST2H2BEQ16778 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 C4orf17Q53FE4 359 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 COA6Q5JTJ3 125 aaKnown RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 OR11H1Q8NG94 326 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 OR11H2Q8NH07 326 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BHQ93079 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 RAB39BQ96DA2 213 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 SFRP2Q96HF1 295 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BNQ99877 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HIST1H2BMQ99879 126 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ABHD14AQ9BUJ0 271 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 SSBP4Q9BWG4 385 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HRH4Q9H3N8 390 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 MS4A5Q9H3V2 200 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 HELZ2Q9BYK8 2649 aaKnown RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TLN2Q9Y4G6 2542 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.16□□□□□ -1.744e-12■■■□□ 18.3
ATXN3-202ENST00000359366 DOPEY2Q9Y3R5 2298 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 A0A1W2PPV4 95 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ZNF705GA8MUZ8 300 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-202ENST00000359366 CORTO00230 105 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 F2RL2O00254 374 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 AGPAT2O15120 278 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 TOX4O94842 621 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 ADH4P08319 380 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 S100A7P31151 101 aa4.16□□□□□ -1.74
ATXN3-202ENST00000359366 DUTP33316 252 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms