RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 NDUFS7O75251 213 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 NIPSNAP3BQ9BS92 247 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 LAMP3Q9UQV4 416 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 TET2Q6N021 2002 aaPredicted RBP10.37□□□□□ -0.75
GGPS1-202ENST00000358966 SAA2-SAA4A0A096LPE2 208 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 F2RL2O00254 374 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 SAA2P0DJI9 122 aaPredicted RBP10.37□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM267Q0VDI3 215 aaPredicted RBP10.37□□□□□ -0.75
GGPS1-202ENST00000358966 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 ZNF66Q6ZN08 573 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 SH3BGRL3Q9H299 93 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 JPT1Q9UK76 154 aa10.37□□□□□ -0.75
GGPS1-202ENST00000358966 CD33P20138 364 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 PDLIM4P50479 330 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
GGPS1-202ENST00000358966 EFNB3Q15768 340 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 HSPB7Q9UBY9 170 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 COX11Q9Y6N1 276 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 DUTP33316 252 aaKnown RBP10.36□□□□□ -0.75
GGPS1-202ENST00000358966 PLA2G5P39877 138 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 PAX9P55771 341 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 GNB2P62879 340 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 ID3Q02535 119 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 CR1LQ2VPA4 569 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM200BQ69YZ2 307 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 OR2C3Q8N628 320 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
GGPS1-202ENST00000358966 FBN2P35556 2912 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 TRBV24-1A0A075B6N3 115 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SERTM2A0A1B0GWG4 89 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 CLDN34H7C241 214 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 PITX3O75364 302 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 CDKN1AP38936 164 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 REG1BP48304 166 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 CCL20P78556 96 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SSX8Q7RTT4 187 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 ZDHHC16Q969W1 377 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 BBC3Q96PG8 261 aaPredicted RBP10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SPIN2AQ99865 258 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SPIN2BQ9BPZ2 258 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 RBKSQ9H477 322 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 YPEL1O60688 119 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 GAPDHP04406 335 aaKnown RBP10.35□□□□□ -0.75
GGPS1-202ENST00000358966 RND2P52198 227 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 DIAPH2-AS1Q14236 149 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 YPEL2Q96QA6 119 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 ABCA12Q86UK0 2595 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SRP19P09132 144 aaKnown RBP10.35□□□□□ -0.75
GGPS1-202ENST00000358966 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM252Q8N6L7 170 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 IL22RA2Q969J5 263 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 PINX1Q96BK5 328 aaKnown RBP10.35□□□□□ -0.75
GGPS1-202ENST00000358966 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM204Q9BSN7 226 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
GGPS1-202ENST00000358966 A0A1B0GW64 132 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 CLEC18AA5D8T8 446 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 CATR1Q13166 79 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 C1orf122Q6ZSJ8 110 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 CLEC18CQ8NCF0 446 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 OR5C1Q8NGR4 320 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 IDI2-AS1Q9NZ38 188 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 TRAV3A0A0B4J244 114 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 NDUFB3O43676 98 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 GPR137BO60478 399 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 P2RY1P47900 373 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
GGPS1-202ENST00000358966 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 FAM213BQ8TBF2 198 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
GGPS1-202ENST00000358966 NAV3Q8IVL0 2385 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 hADV38S2A0JD32 116 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-202ENST00000358966 DYNLT3P51808 116 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 RUNX1Q01196 453 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 WDR25Q64LD2 544 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-202ENST00000358966 FAM216AQ8WUB2 273 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 LYRM2Q9NU23 88 aaPredicted RBP10.33□□□□□ -0.76
GGPS1-202ENST00000358966 A0A1B0GU03 582 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 DUXBA0A1W2PPF3 345 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 RNF212BA8MTL3 300 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 OR9G9P0C7N8 305 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 SEC11BP0C7V7 166 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 MYOD1P15172 320 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 PRSS8Q16651 343 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 IGFBPL1Q8WX77 278 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 MEGF9Q9H1U4 602 aa10.33□□□□□ -0.76
GGPS1-202ENST00000358966 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms