RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 NPDC1Q9NQX5 325 aaPredicted RBP9.45□□□□□ -0.9
COL11A1-202ENST00000358392 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 ALS2Q96Q42 1657 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
COL11A1-202ENST00000358392 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 C1QL4Q86Z23 238 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 DMRTC2Q8IXT2 367 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-202ENST00000358392 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 OR5P3Q8WZ94 311 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 GDF15Q99988 308 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 COL22A1Q8NFW1 1626 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-202ENST00000358392 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 TFF1P04155 84 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 FXYD7P58549 80 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-202ENST00000358392 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 NDUFA2O43678 99 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 VENTXO95231 258 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 FOXL1Q12952 345 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 ZNF362Q5T0B9 420 aaPredicted RBP9.44□□□□□ -0.9
COL11A1-202ENST00000358392 VGLL1Q99990 258 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 ANKRD36A6QL64 1941 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 CD8AP01732 235 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 C1QTNF9P0C862 333 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 CA7P43166 264 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 STPG1Q5TH74 334 aa9.44□□□□□ -0.9
COL11A1-202ENST00000358392 BCORQ6W2J9 1755 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 DPM2O94777 84 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 C1orf100Q5SVJ3 147 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FGF11Q92914 225 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 LTBRP36941 435 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 GZMBP10144 247 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 CD33P20138 364 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 CD300EQ496F6 205 aaPredicted RBP9.43□□□□□ -0.9
COL11A1-202ENST00000358392 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A10PA6NDY2 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A18PA6NE21 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A16PA6NEW6 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A20PA6NIJ5 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A8PA6NJQ4 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A7PA6NKC0 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A22PA8MWA6 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A12PA8MX19 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A5PA8MXJ8 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A23PA8MXZ1 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 CD55P08174 381 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A15PP0C7V4 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A13PP0C7W8 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A14PP0C7W9 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 FAM90A24PP0C7X0 464 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 OCIAD2Q56VL3 154 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 TIMM23BQ5SRD1 257 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 ASCL4Q6XD76 172 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 ACP7Q6ZNF0 438 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 TNRC6CQ9HCJ0 1690 aaKnown RBP9.43□□□□□ -0.9
COL11A1-202ENST00000358392 CRPP02741 224 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
COL11A1-202ENST00000358392 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
COL11A1-202ENST00000358392 M0R2P5 195 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 IGKCP01834 107 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 MAJINQ3KP22 176 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 SAXO1Q8IYX7 474 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 PDCD11Q14690 1871 aaKnown RBP9.42□□□□□ -0.9
COL11A1-202ENST00000358392 A0A1W2PQF6 199 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 COX11Q9Y6N1 276 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 C4orf51C9J302 202 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
COL11A1-202ENST00000358392 MESP2Q0VG99 397 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 FAM216BQ8N7L0 139 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 TP53BP1Q12888 1972 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-202ENST00000358392 ICE1Q9Y2F5 2266 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 TRAV8-1A0A0A6YYK1 113 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 A8MWV9 139 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 SFXN3Q9BWM7 321 aa9.42□□□□□ -0.9
COL11A1-202ENST00000358392 LOXL4Q96JB6 756 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 PRDM13Q9H4Q3 707 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 ZFAND6Q6FIF0 208 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 PYYP10082 97 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 LAMTOR3Q9UHA4 124 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 SRSF1Q07955 248 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL11A1-202ENST00000358392 OR13A1Q8NGR1 328 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 TMEM54Q969K7 222 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 ADAMTSL1Q8N6G6 1762 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 FOXH1O75593 365 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 COX6A1P12074 109 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 FAM27E3Q08E93 113 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms