RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 DMRTA2Q96SC8 542 aa10.86□□□□□ -0.67
SMC4-202ENST00000357388 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
SMC4-202ENST00000357388 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
SMC4-202ENST00000357388 SHROOM3Q8TF72 1996 aa10.86□□□□□ -0.67
SMC4-202ENST00000357388 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
SMC4-202ENST00000357388 OR5P3Q8WZ94 311 aa10.86□□□□□ -0.67
SMC4-202ENST00000357388 VKORC1Q9BQB6 163 aa10.86□□□□□ -0.67
SMC4-202ENST00000357388 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 CT83Q5H943 113 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 SLC50A1Q9BRV3 221 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 GP6Q9HCN6 339 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 COL22A1Q8NFW1 1626 aaPredicted RBP10.85□□□□□ -0.67
SMC4-202ENST00000357388 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
SMC4-202ENST00000357388 C9JCJ5 164 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 ASCL4Q6XD76 172 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 SPRED2Q7Z698 418 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 MPZP25189 248 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 CSRP2Q16527 193 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
SMC4-202ENST00000357388 C18orf12Q96KH6 178 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 TMEM144Q7Z5S9 345 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 LAIR2Q6ISS4 152 aa10.85□□□□□ -0.67
SMC4-202ENST00000357388 TRAV12-3A0A0B4J271 114 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 AMBPP02760 352 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 REG1AP05451 166 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 RTN4RL2Q86UN3 420 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 TMEM86BQ8N661 226 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 HS3ST3B1Q9Y662 390 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 ZNF826PQ6ZT77 177 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
SMC4-202ENST00000357388 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 F2Z2F3 143 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 TRGV3P03979 118 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 C1QTNF9P0C862 333 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 FOXL1Q12952 345 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 MIR17HGQ75NE6 70 aa10.84□□□□□ -0.67
SMC4-202ENST00000357388 A6NNC1 897 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 TNFRSF6BO95407 300 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 TDGF1P13385 188 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 PLSCR4Q9NRQ2 329 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 A0A0G2JK05 382 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 LHFPL4Q7Z7J7 247 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 COLCA2A8K830 154 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 ZIC3O60481 467 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 CD5P06127 495 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 CD69Q07108 199 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 TMEM155Q4W5P6 130 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 TOMM7Q9P0U1 55 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 DDX60LQ5H9U9 1706 aaKnown RBP10.83□□□□□ -0.68
SMC4-202ENST00000357388 FAM90A1Q86YD7 464 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
SMC4-202ENST00000357388 FAM90A9PA6NNJ1 464 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 PEMTQ9UBM1 199 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 KLF4O43474 513 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 TBX6O95947 436 aaPredicted RBP10.82□□□□□ -0.68
SMC4-202ENST00000357388 CELA2AP08217 269 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 PILRAQ9UKJ1 303 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 CRPP02741 224 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 ZNF883P0CG24 379 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 GZMBP10144 247 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 TEX38Q6PEX7 206 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 SLC25A45Q8N413 288 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 FAM168AQ92567 244 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 GPHA2Q96T91 129 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 RNF126Q9BV68 326 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 USP54Q70EL1 1684 aa10.82□□□□□ -0.68
SMC4-202ENST00000357388 TPTE2P1Q5T6R2 138 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 SCARF2Q96GP6 870 aaPredicted RBP10.81□□□□□ -0.68
SMC4-202ENST00000357388 C21orf62Q9NYP8 219 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 FBLN5Q9UBX5 448 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 NAPSAO96009 420 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
SMC4-202ENST00000357388 CD5LO43866 347 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 CEACAM1P13688 526 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 GLRXP35754 106 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 EGR4Q05215 589 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 PEAR1Q5VY43 1037 aaPredicted RBP10.81□□□□□ -0.68
SMC4-202ENST00000357388 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 A0A0G2JMM0 328 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 A0A1W2PPB8 328 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 KIR3DP1A8MWS1 328 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 COX6A1P12074 109 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
SMC4-202ENST00000357388 DPM3Q9P2X0 92 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 IGKV1D-42A0A075B6H8 117 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 TOMM40O96008 361 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
SMC4-202ENST00000357388 SLC22A18ASQ8N1D0 253 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 TMEM42Q69YG0 159 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 Q6ZT83 130 aa10.8□□□□□ -0.68
SMC4-202ENST00000357388 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms