RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 C9orf118A6NHY6 69 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 Q6ZSR3 168 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 RPP25LQ8N5L8 163 aaKnown RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 CNOT1A5YKK6 2376 aaKnown RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 SMIM27A0A1W2PRY6 76 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 A0A1W2PS18 150 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 NMUP48645 174 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 OR1D5P58170 312 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 INO80CQ6PI98 192 aaPredicted RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ZNF497Q6ZNH5 498 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 LYPD6Q86Y78 171 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 FLVCR1-AS1Q8TAF5 88 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 GPR82Q96P67 336 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 THYN1Q9P016 225 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 HIGD1AQ9Y241 93 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 SCO2A0A1W2PP80 73 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 CRYGSP22914 178 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 FXYD3Q14802 87 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 SLC25A39Q9BZJ4 359 aaPredicted RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 SIGLEC8Q9NYZ4 499 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 NOTCH4Q99466 2003 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 PEX7O00628 323 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 FOXA2Q9Y261 457 aaPredicted RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 LOC105371242A0A075B767 164 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 PPIAL4CA0A0B4J2A2 164 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 IGKV1-9A0A0C4DH69 117 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 MGST3O14880 152 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 PPIAL4GP0DN37 164 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ZNF83P51522 516 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 IGLC7A0M8Q6 106 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 OTOL1A6NHN0 477 aaPredicted RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ZNF296Q8WUU4 475 aaPredicted RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 REPIN1Q9BWE0 567 aaKnown RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 TM4SF5O14894 197 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 HBDP02042 147 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 AZU1P20160 251 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ASIPP42127 132 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ATP5G3P48201 142 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 C1QL2Q7Z5L3 287 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 ORMDL3Q8N138 153 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 OR2M3Q8NG83 312 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 C8orf46Q8TAG6 207 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 H1FXQ92522 213 aaKnown RBP5.53□□□□□ -1.52
TRIM38-201ENST00000357085 RFNGQ9Y644 331 aa5.53□□□□□ -1.52
TRIM38-201ENST00000357085 CSN3P07498 182 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SRYQ05066 204 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 TFF3Q07654 80 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 CD300EQ496F6 205 aaPredicted RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SAMD5Q5TGI4 173 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 ZFAND6Q6FIF0 208 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 NAV3Q8IVL0 2385 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SP9P0CG40 484 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 RPS16P62249 146 aaKnown RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 GNB1P62873 340 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 BVES-AS1Q5T3Y7 98 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 C15orf61A6NNL5 157 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SCGB1C2P0DMR2 95 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 PDCD1Q15116 288 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SPINK9Q5DT21 86 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 RPRMLQ8N4K4 120 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 TCF19Q9Y242 345 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 ZDBF2Q9HCK1 2354 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 RASL10BQ96S79 203 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 FER1L5A0AVI2 2057 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 A0A1W2PNR3 127 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 OR11H12B2RN74 326 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SPTBN2O15020 2390 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 COX6CP09669 75 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 OR11H1Q8NG94 326 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 OR11H2Q8NH07 326 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF502Q8TBZ5 544 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 SCRT1Q9BWW7 348 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 GEMIN7Q9H840 131 aaKnown RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 IGLV3-12A0A075B6K2 115 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 IGHV1OR21-1A0A087WYE8 117 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 APOMO95445 188 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 RPL8P62917 257 aaKnown RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 CRIPAKQ8N1N5 446 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 TEX29Q8N6K0 151 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 FADS6Q8N9I5 356 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 FAM234AQ9H0X4 552 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 MESP2Q0VG99 397 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF585BQ52M93 769 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 MIC13Q5XKP0 118 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 PNRC2Q9NPJ4 139 aaKnown RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 IGHV1-24A0A0C4DH33 117 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 K7EMI3 77 aa5.52□□□□□ -1.53
TRIM38-201ENST00000357085 CRXO43186 299 aaPredicted RBP5.52□□□□□ -1.53
TRIM38-201ENST00000357085 IGLV3-1P01715 115 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 GAGE13Q4V321 117 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 SSC4DQ8WTU2 575 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 FCGR3BO75015 233 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 RNFT1Q5M7Z0 435 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 LYPD1Q8N2G4 141 aa5.51□□□□□ -1.53
TRIM38-201ENST00000357085 IGFLR1Q9H665 355 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms