RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ERVK11-1P61568 191 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 PVRIGQ6DKI7 326 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 MRPL52Q86TS9 123 aaKnown RBP4.68□□□□□ -1.66
PTPRD-202ENST00000356435 RFLNBQ8N5W9 214 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 PRADC1Q9BSG0 188 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-35A0A0C4DH35 117 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 CENPVL1A0A0U1RR11 272 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 COLCA2A8K830 154 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 E9PLN8 166 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 SOD3P08294 240 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 MTURNQ8N3F0 131 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 VKORC1Q9BQB6 163 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 TRBV5-7A0A0A0MS05 114 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 NPIPB13A6NJU9 1138 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 PEX7O00628 323 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ZNHIT1O43257 154 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ICAM4Q14773 271 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 PSMG3Q9BT73 122 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 CHCHD2Q9Y6H1 151 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 PROB1E7EW31 1015 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 PCP4P48539 62 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF324BQ6AW86 544 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ASCL4Q6XD76 172 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ZNRF1Q8ND25 227 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 SPSB2Q99619 263 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM8BA6NDV4 472 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 POC1AQ8NBT0 407 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 RNASEH2CQ8TDP1 164 aaKnown RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 C3orf36Q3SXR2 165 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 SPRED2Q7Z698 418 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 SFRP2Q96HF1 295 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 NPCDR1Q9BY65 106 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 RPP21Q9H633 154 aaKnown RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 CD7P09564 240 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 AKIRIN1Q9H9L7 192 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ST20Q9HBF5 79 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 ICE1Q9Y2F5 2266 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 PLXNB2O15031 1838 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 A0A1W2PR77 199 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 C17orf100A8MU93 164 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV2-70P01814 119 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 CENPWQ5EE01 88 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 HAPLN4Q86UW8 402 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM160Q9NX00 188 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 FBLN5Q9UBX5 448 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 COL11A2P13942 1736 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 XIRP1Q702N8 1843 aaKnown RBP4.67□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM190Q8WZ59 177 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 CHCHD5Q9BSY4 110 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 WNT10AQ9GZT5 417 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 S4R3C0 116 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 C1QTNF9BB2RNN3 333 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 LY6G6FQ5SQ64 297 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM86BQ8N661 226 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 OR1P1Q8NH06 330 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 SIGLEC12Q96PQ1 595 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 GPR132Q9UNW8 380 aa4.67□□□□□ -1.66
PTPRD-202ENST00000356435 CELA3AP09093 270 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 GPX4P36969 197 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-202ENST00000356435 OTORQ9NRC9 128 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 EP300Q09472 2414 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-202ENST00000356435 EREGO14944 169 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 FOXC2Q99958 501 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 AICDAQ9GZX7 198 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TRAV14DV4A0A0A6YYC5 116 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TGIF2-C20orf24A0A0A6YYL0 155 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 A0A1B0GW64 132 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 KLK2P20151 261 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 OTX1P32242 354 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-202ENST00000356435 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 ASCL2Q99929 193 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 PLXNA1Q9UIW2 1896 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 SMCHD1A6NHR9 2005 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TRAV40A0A0B4J280 105 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 C1QCP02747 245 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 LY6DQ14210 128 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM187Q14656 261 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 S100A7L2Q5SY68 101 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 C3orf56Q8N813 242 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 RNF166Q96A37 237 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-202ENST00000356435 C12orf77C9JDV5 145 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TCF21O43680 179 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 PSMG4Q5JS54 123 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 FER1L6-AS1Q8NA97 138 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 OR52E5Q8NH55 327 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 KNL1Q8NG31 2342 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TRAV41A0A0B4J266 112 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-202ENST00000356435 PIN1P1O15428 100 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 CD28P10747 220 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 DDTP30046 118 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 FUT5Q11128 374 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM133Q9H2Q1 129 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 KIAA1217Q5T5P2 1943 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 IQCF6A8MYZ5 107 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 RFPL3SP0C7P2 107 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 P2RY4P51582 365 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 NEUROG1Q92886 237 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms