RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ESDP10768 282 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 GATA2P23769 480 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 PRR31Q5SQ13 230 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 GDF15Q99988 308 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 LOC105371242A0A075B767 164 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 IGHV1-45A0A0A0MS14 117 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 TRAV8-1A0A0A6YYK1 113 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 TDGF1P3P51864 188 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 TMEM42Q69YG0 159 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-201ENST00000356183 TRGV3P03979 118 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 EGR4Q05215 589 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 GATAD1Q8WUU5 269 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 PIMREGQ9BSJ6 248 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 PIKFYVEQ9Y2I7 2098 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 M0R2P5 195 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 SSBP2P81877 361 aaPredicted RBP9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 SHISA5Q8N114 240 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 GP6Q9HCN6 339 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 SVILO95425 2214 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 C1QTNF9P0C862 333 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 STARD6P59095 220 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 IGLV1-36A0A0B4J1U3 117 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 FGF16O43320 207 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 ATXN8Q156A1 80 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 SRXN1Q9BYN0 137 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 SPINT1O43278 529 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 TPTE2P1Q5T6R2 138 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 YAE1D1Q9NRH1 226 aa9.34□□□□□ -0.91
GTF3C1-201ENST00000356183 PF4P02776 101 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 CA7P43166 264 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FOXL1Q12952 345 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 OR52E5Q8NH55 327 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 SFXN3Q9BWM7 321 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 COLCA2A8K830 154 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 IFI27L2Q9H2X8 130 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 CEP290O15078 2479 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 C21orf140B9A014 251 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 CLEC7AQ9BXN2 247 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 PKIBQ9C010 78 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 FOXS1O43638 330 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 CLEC19AQ6UXS0 136 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 KLF14Q8TD94 323 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 PPIFP30405 207 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 GTSCR1Q86UQ5 136 aa9.33□□□□□ -0.92
GTF3C1-201ENST00000356183 SRSF1Q07955 248 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■■■□□ 19.1
GTF3C1-201ENST00000356183 A0A1B0GTI1 187 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 ERVK11-1P61568 191 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 LHFPL4Q7Z7J7 247 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 WFDC12Q8WWY7 111 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 CRIM1Q9NZV1 1036 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 NR2C2APQ86WQ0 139 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 SAXO1Q8IYX7 474 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 ZNF688P0C7X2 276 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 COL5A3P25940 1745 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 TPRP12270 2363 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 CD7P09564 240 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 CD28P10747 220 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 TMEM186Q96B77 213 aa9.32□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 F8VVB4 439 aa9.31□□□□□ -0.92
GTF3C1-201ENST00000356183 F8VWA3 439 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms