RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MPDU1O75352 247 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CD46P15529 392 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CTRLP40313 264 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CAMPP49913 170 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 GAGE1Q13065 139 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 TIGITQ495A1 244 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 VHLLQ6RSH7 139 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 DEFB108BQ8NET1 73 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 OR4B1Q8NGF8 309 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 TSKUQ8WUA8 353 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 ZNF503Q96F45 646 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CLEC7AQ9BXN2 247 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 ZNF355PQ9NSJ1 428 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CLCF1Q9UBD9 225 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 TRGV10A0A0A0MS01 117 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 ZNF324O75467 553 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 PLAUP00749 431 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 ESDP10768 282 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 DUSP3P51452 185 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 RPP30P78346 268 aaKnown RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 CX3CL1P78423 397 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 IBA57Q5T440 356 aaKnown RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 FAM214BQ7L5A3 538 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 KIR3DL3Q8N743 410 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 LINC00614P0C842 121 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 USF1P22415 310 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 RPL8P62917 257 aaKnown RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 TNXAQ16473 311 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 LYG1Q8N1E2 194 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 MCRIP2Q9BUT9 160 aaKnown RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 TIMM8BQ9Y5J9 83 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 IGKV1D-17A0A075B6S4 117 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 TRGV5A0A0B4J1U4 118 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.32□□□□□ -1.08
PTPRA-203ENST00000356147 C20orf202A1L168 122 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 LINC00869P0C866 280 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 SMIM21Q3B7S5 101 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 OR10W1Q8NGF6 305 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 CXXC4Q9H2H0 198 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 IFI27L2Q9H2X8 130 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 SLC35D1Q9NTN3 355 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 UQCR10Q9UDW1 63 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 RPH3ALQ9UNE2 315 aa8.32□□□□□ -1.08
PTPRA-203ENST00000356147 GVINP1Q7Z2Y8 2422 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 DYSFO75923 2080 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 PYYP10082 97 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 MFAP2P55001 183 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
PTPRA-203ENST00000356147 RND1Q92730 232 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 SNRNP40Q96DI7 357 aaKnown RBP8.31□□□□□ -1.08
PTPRA-203ENST00000356147 CLEC5AQ9NY25 188 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 TECRQ9NZ01 308 aaKnown RBP8.31□□□□□ -1.08
PTPRA-203ENST00000356147 ABI3Q9P2A4 366 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 SLC45A2Q9UMX9 530 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 MGAQ8IWI9 3026 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 TACC2O95359 2948 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 ATMQ13315 3056 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 ADGRG4Q8IZF6 3080 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-203ENST00000356147 PKDREJQ9NTG1 2253 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 MT-CO2P00403 227 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 APCSP02743 223 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 TDGF1P13385 188 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 RAB31Q13636 194 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 IL19Q9UHD0 177 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
PTPRA-203ENST00000356147 POLEQ07864 2286 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 SAA2-SAA4A0A096LPE2 208 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 C9JCJ5 164 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 CORTO00230 105 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 IGLV2-8P01709 118 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-203ENST00000356147 SSBP2P81877 361 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-203ENST00000356147 GABRA6Q16445 453 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 MSMPQ1L6U9 139 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 GDF5OSQ5U4N7 250 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 OR52E5Q8NH55 327 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 C11orf52Q96A22 123 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 RNF24Q9Y225 148 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 C15orf61A6NNL5 157 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 H0Y8G0 127 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 HSBP1O75506 76 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 IGKV1-16P04430 117 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 ADH4P08319 380 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 CECR9P0C854 216 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 PRRX1P54821 245 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 LOXL3P58215 753 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms