RNA–Protein interactions for RNA: ENST00000355628.9

FAM208A-201, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM208A, Length 5,239 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-201ENST00000355628 PEAR1Q5VY43 1037 aaPredicted RBP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 UNQ5815/PRO19632Q6UWF5 114 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 HEPN1Q6WQI6 88 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 C1QL4Q86Z23 238 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 OR4D5Q8NGN0 318 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 COPS9Q8WXC6 57 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 PHLDA3Q9Y5J5 127 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 PPIAL4CA0A0B4J2A2 164 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 PPIAL4GP0DN37 164 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 SRSF6Q13247 344 aaKnown RBP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 TM4SF20Q53R12 229 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 LINC00469Q8N7U9 141 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 MBD3L1Q8WWY6 194 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 ZNF414Q96IQ9 312 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 SLC17A3O00476 420 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 RBFOX2O43251 390 aaKnown RBP eCLIP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 EP400Q96L91 3159 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 IGFBP2P18065 325 aa13.2□□□□□ -0.3
FAM208A-201ENST00000355628 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
FAM208A-201ENST00000355628 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 APOBEC3AP31941 199 aaPredicted RBP13.19□□□□□ -0.3
FAM208A-201ENST00000355628 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
FAM208A-201ENST00000355628 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BKO60814 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BJP06899 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BOP23527 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BBP33778 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BDP58876 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BCP62807 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST2H2BEQ16778 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.19□□□□□ -0.3
FAM208A-201ENST00000355628 C9orf106Q8NAJ2 232 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BHQ93079 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BNQ99877 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H2BMQ99879 126 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 REG4Q9BYZ8 158 aa13.19□□□□□ -0.3
FAM208A-201ENST00000355628 LGALS3P17931 250 aaKnown RBP13.18□□□□□ -0.3
FAM208A-201ENST00000355628 CCL20P78556 96 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 LHFPL1Q86WI0 220 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 PRDM13Q9H4Q3 707 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
FAM208A-201ENST00000355628 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
FAM208A-201ENST00000355628 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 ANK1P16157 1881 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 A0A1B0GUT8 65 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 COLCA2A8K830 154 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 HTN1P15515 57 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 OR13A1Q8NGR1 328 aa13.18□□□□□ -0.3
FAM208A-201ENST00000355628 TRBV24-1A0A075B6N3 115 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 KBTBD11-OT1A0A1B0GTJ5 212 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 C7orf71A4D174 169 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 FAM90A9PA6NNJ1 464 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 REG1AP05451 166 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 GFRA1P56159 465 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 CHD5Q8TDI0 1954 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 ABCA4P78363 2273 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 MEF2CQ06413 473 aaPredicted RBP13.17□□□□□ -0.3
FAM208A-201ENST00000355628 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 CYTL1Q9NRR1 136 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 LDLRAD4O15165 306 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 ZNRF1Q8ND25 227 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 WNT10AQ9GZT5 417 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 A0A0A6YYD4 124 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 MBNL2Q5VZF2 373 aaKnown RBP13.17□□□□□ -0.3
FAM208A-201ENST00000355628 NEUROG1Q92886 237 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
FAM208A-201ENST00000355628 WBP1Q96G27 269 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 DEPPQ9NTK1 212 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 MOSP00540 346 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 IL4P05112 153 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 HIST1H1AQ02539 215 aaPredicted RBP13.16□□□□□ -0.3
FAM208A-201ENST00000355628 SRSF4Q08170 494 aaKnown RBP13.16□□□□□ -0.3
FAM208A-201ENST00000355628 OR11H1Q8NG94 326 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 OR11H2Q8NH07 326 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 WFDC1Q9HC57 220 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 A0A087WV48 116 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 IGKV1D-13A0A0B4J2D9 117 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 PPP1R17O96001 155 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 IGKV1-13P0DP09 117 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 GPR82Q96P67 336 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 TECTAO75443 2155 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 ATP5LO75964 103 aa13.16□□□□□ -0.3
FAM208A-201ENST00000355628 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms