RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 IGKV1OR2-108A0A075B7D4 117 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 INS-IGF2F8WCM5 200 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 AREGP15514 252 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 C8orf31Q8N9H6 132 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 OR4P4Q8NGL7 312 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 ZNF596Q8TC21 504 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 LRFN3Q9BTN0 628 aa18■□□□□ 0.47
UPF3A-201ENST00000351487 FOXH1O75593 365 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 MIR17HGQ75NE6 70 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 PNKDQ8N490 385 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 PFDN5Q99471 154 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 NABP2Q9BQ15 211 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 NDUFA4L2Q9NRX3 87 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 TMEM106BQ9NUM4 274 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 XKRY2A2RUG3 117 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 GAMTQ14353 236 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 MOB3BQ86TA1 216 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 LINC00311Q8N616 119 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 RNASEH2CQ8TDP1 164 aaKnown RBP17.99■□□□□ 0.47
UPF3A-201ENST00000351487 FAM122AQ96E09 287 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 LY96Q9Y6Y9 160 aa17.99■□□□□ 0.47
UPF3A-201ENST00000351487 C9JCJ5 164 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 CD69Q07108 199 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 TEX38Q6PEX7 206 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 UHRF2Q96PU4 802 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 C19orf24Q9BVV8 132 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 MAP1BP46821 2468 aaKnown RBP17.98■□□□□ 0.47
UPF3A-201ENST00000351487 RPL15P61313 204 aaKnown RBP17.98■□□□□ 0.47
UPF3A-201ENST00000351487 RPL8P62917 257 aaKnown RBP17.98■□□□□ 0.47
UPF3A-201ENST00000351487 OR4A5Q8NH83 315 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 OCC1Q8TAD7 63 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 COMMD5Q9GZQ3 224 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 PRDM13Q9H4Q3 707 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 TMEM167BQ9NRX6 74 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 SH3BGRL2Q9UJC5 107 aa17.98■□□□□ 0.47
UPF3A-201ENST00000351487 GVINP1Q7Z2Y8 2422 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 VSTM5A8MXK1 200 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 NDUFB3O43676 98 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 AMBPP02760 352 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 USF1P22415 310 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-201ENST00000351487 LRRC10Q5BKY1 277 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 ASCL5Q7RTU5 278 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 PDPNQ86YL7 162 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 CACNG8Q8WXS5 425 aa17.97■□□□□ 0.47
UPF3A-201ENST00000351487 RNASE6Q93091 150 aaKnown RBP17.97■□□□□ 0.47
UPF3A-201ENST00000351487 FLYWCH2Q96CP2 140 aaKnown RBP17.97■□□□□ 0.47
UPF3A-201ENST00000351487 ZFHX2Q9C0A1 2572 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-201ENST00000351487 OR10W1Q8NGF6 305 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 OR4C13Q8NGP0 309 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 SGMS2Q8NHU3 365 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 TMEM167AQ8TBQ9 72 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 CCL17Q92583 94 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 TMEM186Q96B77 213 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 ACTL6BO94805 426 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 OR5G3P0C626 314 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 CHRNB4P30926 498 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 OR10J1P30954 320 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 ZNF137PP52743 207 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 LYPD2Q6UXB3 125 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 VSTM2AQ8TAG5 236 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 H1FXQ92522 213 aaKnown RBP17.96■□□□□ 0.47
UPF3A-201ENST00000351487 TECRQ9NZ01 308 aaKnown RBP17.96■□□□□ 0.47
UPF3A-201ENST00000351487 KAAG1Q9UBP8 84 aa17.96■□□□□ 0.47
UPF3A-201ENST00000351487 TRAV20A0A0B4J274 112 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 DLL1O00548 723 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 COL8A2P25067 703 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 PQLC2Q6ZP29 291 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 OR10G8Q8NGN5 311 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 TMEM37Q8WXS4 190 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 ST6GALNAC6Q969X2 333 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 CTSZQ9UBR2 303 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 LAMA5O15230 3695 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 ROS1P08922 2347 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 PCNX1Q96RV3 2341 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 A0A087X0M5 115 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 A0A0U1RQK1 487 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 A0A1B0GX30 115 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 ZNF320A2RRD8 509 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 DVL1O14640 695 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 DLX6P56179 175 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 PSG5Q15238 335 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 OR10X1Q8NGY0 326 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 WFIKKN1Q96NZ8 548 aa17.95■□□□□ 0.46
UPF3A-201ENST00000351487 A0A1W2PN81 502 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 SHISA9B4DS77 424 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 LOXP28300 417 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-201ENST00000351487 GPX4P36969 197 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-201ENST00000351487 REG1BP48304 166 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 ERHP84090 104 aaKnown RBP17.94■□□□□ 0.46
UPF3A-201ENST00000351487 OR5R1Q8NH85 324 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 OR9G1Q8NH87 305 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 ZNF503Q96F45 646 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 NGBQ9NPG2 151 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 K7EN84 100 aa17.94■□□□□ 0.46
UPF3A-201ENST00000351487 TRAV9-1A0A075B6T8 112 aa17.93■□□□□ 0.46
UPF3A-201ENST00000351487 TAS2R45P59539 299 aa17.93■□□□□ 0.46
UPF3A-201ENST00000351487 DMRTC2Q8IXT2 367 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-201ENST00000351487 EAF1Q96JC9 268 aaPredicted RBP17.93■□□□□ 0.46
UPF3A-201ENST00000351487 APC2O95996 2303 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 CNN1P51911 297 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms