RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
TRIM4-201ENST00000349062 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 NPCDR1Q9BY65 106 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 USP9YO00507 2555 aaPredicted RBP11.38□□□□□ -0.59
TRIM4-201ENST00000349062 EPG5Q9HCE0 2579 aa11.38□□□□□ -0.59
TRIM4-201ENST00000349062 IGHV1-69-2A0A0G2JMI3 117 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM178BH3BS89 294 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 PSMB3P49720 205 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
TRIM4-201ENST00000349062 OR51B2Q9Y5P1 312 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 PIGBOS1A0A0B4J2F0 54 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 J3QR06 171 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 MBP02144 154 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 RAB7AP51149 207 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 CIB3Q96Q77 187 aaPredicted RBP11.37□□□□□ -0.59
TRIM4-201ENST00000349062 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 CSPG4Q6UVK1 2322 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 LRRK2Q5S007 2527 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 CA2P00918 260 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 NUTF2P61970 127 aaKnown RBP11.37□□□□□ -0.59
TRIM4-201ENST00000349062 TEX38Q6PEX7 206 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 OR2T10Q8NGZ9 312 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 C2orf88Q9BSF0 95 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
TRIM4-201ENST00000349062 FCN3O75636 299 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 RELBQ01201 579 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 EIF4EBP1Q13541 118 aaPredicted RBP11.36□□□□□ -0.59
TRIM4-201ENST00000349062 PARLQ9H300 379 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 FKBP11Q9NYL4 201 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 F2RL2O00254 374 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 WNT2P09544 360 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
TRIM4-201ENST00000349062 RTL8BQ17RB0 113 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 TMEM256Q8N2U0 113 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 ONECUT1Q9UBC0 465 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 SLC25A17O43808 307 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 LGALS4P56470 323 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
TRIM4-201ENST00000349062 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 MS4A10Q96PG2 267 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
TRIM4-201ENST00000349062 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
TRIM4-201ENST00000349062 TRBV24-1A0A075B6N3 115 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 NPY1RP25929 384 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 CFHR2P36980 270 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 TOMM20LQ6UXN7 152 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 NUP37Q8NFH4 326 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 VKORC1Q9BQB6 163 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 CFAP46Q8IYW2 2715 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 DSCAML1Q8TD84 2053 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 FAM90A26D6RGX4 464 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 M0R143 59 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-201ENST00000349062 GATA4P43694 442 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-201ENST00000349062 HCP5Q6MZN7 132 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-201ENST00000349062 TBX15Q96SF7 602 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 COMMD5Q9GZQ3 224 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
TRIM4-201ENST00000349062 CD81P60033 236 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 SLC24A4Q8NFF2 622 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 ACTR3CQ9C0K3 210 aaPredicted RBP11.34□□□□□ -0.59
TRIM4-201ENST00000349062 SPINK4O60575 86 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 APOA2P02652 100 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 THBS3P49746 956 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 NDUFS7O75251 213 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 HRASP01112 189 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 APOBEC3AP31941 199 aaPredicted RBP11.34□□□□□ -0.59
TRIM4-201ENST00000349062 RND2P52198 227 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 RITA1Q96K30 269 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
TRIM4-201ENST00000349062 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
TRIM4-201ENST00000349062 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
TRIM4-201ENST00000349062 IGFBP2P18065 325 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 ARF6P62330 175 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 PXMP4Q9Y6I8 212 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 TGOLN2O43493 480 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 P0C879 139 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 CDKN1AP38936 164 aa11.33□□□□□ -0.6
TRIM4-201ENST00000349062 SERF2P84101 59 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms