RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 TFF1P04155 84 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 PPOXP50336 477 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 FAM222BQ8WU58 562 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 IFI27L2Q9H2X8 130 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
NUP50-201ENST00000347635 DOCK9Q9BZ29 2069 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 IGKV1-6A0A0C4DH72 117 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 J3QR89 54 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 GNG7O60262 68 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 TMEM177Q53S58 311 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 TEX38Q6PEX7 206 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 Q6ZS92 163 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 MPDZO75970 2070 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
NUP50-201ENST00000347635 CYB5R2Q6BCY4 276 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 LINC01551Q86U37 167 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 OR8A1Q8NGG7 326 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 YPEL1O60688 119 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 RPL30P62888 115 aaKnown RBP12.28□□□□□ -0.44
NUP50-201ENST00000347635 FOXL1Q12952 345 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 Q6P435 159 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
NUP50-201ENST00000347635 YPEL2Q96QA6 119 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 DOCK8Q8NF50 2099 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 CORTO00230 105 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 LILRA1O75019 489 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 MORN2Q502X0 79 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 GTF2H5Q6ZYL4 71 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 HS3ST6Q96QI5 342 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 WNT10AQ9GZT5 417 aa12.28□□□□□ -0.44
NUP50-201ENST00000347635 TMEM50AO95807 157 aa12.27□□□□□ -0.44
NUP50-201ENST00000347635 DUTP33316 252 aaKnown RBP12.27□□□□□ -0.44
NUP50-201ENST00000347635 IGHG3P01860 377 aa12.27□□□□□ -0.44
NUP50-201ENST00000347635 OR4C13Q8NGP0 309 aa12.27□□□□□ -0.44
NUP50-201ENST00000347635 NPIPB3Q92617 1050 aa12.27□□□□□ -0.44
NUP50-201ENST00000347635 A6NDN8 102 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 PAX9P55771 341 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 TREML4Q6UXN2 200 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 LINC01560Q8TB33 94 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 PLSCR4Q9NRQ2 329 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 KBTBD11-OT1A0A1B0GTJ5 212 aa12.27□□□□□ -0.45
NUP50-201ENST00000347635 RBFOX2O43251 390 aaKnown RBP eCLIP12.26□□□□□ -0.45
NUP50-201ENST00000347635 SLC25A17O43808 307 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 LGALS7P47929 136 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 EFNB3Q15768 340 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 CNOT1A5YKK6 2376 aaKnown RBP12.26□□□□□ -0.45
NUP50-201ENST00000347635 IGHV3-72A0A0B4J1Y9 119 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 RNASE7Q9H1E1 156 aaKnown RBP12.26□□□□□ -0.45
NUP50-201ENST00000347635 IZUMO1RA6ND01 250 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 SGK494Q96LW2 274 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 HBBP68871 147 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
NUP50-201ENST00000347635 SAA2-SAA4A0A096LPE2 208 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 PSPNO60542 156 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 SAA2P0DJI9 122 aaPredicted RBP12.25□□□□□ -0.45
NUP50-201ENST00000347635 GZMBP10144 247 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 C12orf54Q6X4T0 127 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 PRSS33Q8NF86 280 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 NRN1Q9NPD7 142 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 FOXH1O75593 365 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 REG1AP05451 166 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 SLC25A34Q6PIV7 304 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 BEND2Q8NDZ0 799 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
NUP50-201ENST00000347635 CA7P43166 264 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 TMEM144Q7Z5S9 345 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 OR52E5Q8NH55 327 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 OSR1Q8TAX0 266 aaPredicted RBP12.25□□□□□ -0.45
NUP50-201ENST00000347635 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
NUP50-201ENST00000347635 PI4KAP42356 2102 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 ATP5J2P56134 94 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 ZNF124Q15973 351 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 LPAR2Q9HBW0 351 aa12.25□□□□□ -0.45
NUP50-201ENST00000347635 PEX7O00628 323 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 ZNF585BQ52M93 769 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 TMEM186Q96B77 213 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 SNRNP40Q96DI7 357 aaKnown RBP12.24□□□□□ -0.45
NUP50-201ENST00000347635 CCL19Q99731 98 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 C2orf88Q9BSF0 95 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 GGTLC1Q9BX51 225 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 COL25A1Q9BXS0 654 aaPredicted RBP12.24□□□□□ -0.45
NUP50-201ENST00000347635 IGHV3-48P01763 117 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 RELBQ01201 579 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 SSC4DQ8WTU2 575 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 TMSB15BA0A087X1C1 80 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 K7ENP7 123 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 OR2J3O76001 311 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 C1orf194Q5T5A4 169 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 LEMD1Q68G75 181 aa12.24□□□□□ -0.45
NUP50-201ENST00000347635 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms