RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 OR9G1Q8NH87 305 aa11.37□□□□□ -0.59
COL6A3-202ENST00000347401 A0A0G2JLM5 398 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 CALYQ9NYX4 217 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 FAM157AC9JC47 383 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 IL11P20809 199 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 DLX4Q92988 240 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-202ENST00000347401 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 A0A1W2PPV9 198 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 SHISA7A6NL88 538 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 PRR33A8MZF0 331 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 SHISA8B8ZZ34 492 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 DRD3P35462 400 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 C9orf40Q8IXQ3 194 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 FZR1Q9UM11 496 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 VEGFBP49765 207 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 TDHQ8IZJ6 230 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 IGHV1-69-2A0A0G2JMI3 117 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 CEACAM4O75871 244 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 PAX2Q02962 417 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
COL6A3-202ENST00000347401 GDF15Q99988 308 aa11.36□□□□□ -0.59
COL6A3-202ENST00000347401 CDK2AP2O75956 126 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 CCL2P13500 99 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 PLAURQ03405 335 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 ESDP10768 282 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 WNT10AQ9GZT5 417 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 IGLV1-36A0A0B4J1U3 117 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 NXPH1P58417 271 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 PCSK4Q6UW60 755 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 IFI27P40305 119 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-202ENST00000347401 MYEOVQ96EZ4 313 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 MORN3Q6PF18 240 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-202ENST00000347401 RND2P52198 227 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 ATOH7Q8N100 152 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
COL6A3-202ENST00000347401 ADRA2AP08913 450 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 ATP5G2Q06055 141 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 TMEM86BQ8N661 226 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 BOD1L2Q8IYS8 172 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 CLEC7AQ9BXN2 247 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 LY96Q9Y6Y9 160 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 A0A1B0GTI1 187 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 LILRA6Q6PI73 481 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 UCNP55089 124 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 LHFPL6Q9Y693 200 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 FXYD3Q14802 87 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 SPINK14Q6IE38 97 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 KLK10O43240 276 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 SOX8P57073 446 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 AGMATQ9BSE5 352 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
COL6A3-202ENST00000347401 PSG4Q00888 419 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 ZNF818PQ6ZRF7 136 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 SIRT4Q9Y6E7 314 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-202ENST00000347401 PRKNO60260 465 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-202ENST00000347401 SERF1AO75920 110 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 PLXNA4Q9HCM2 1894 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 C9JCJ5 164 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 FGF16O43320 207 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 CRPP02741 224 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 CD5P06127 495 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 RTN4RL2Q86UN3 420 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 COQ2Q96H96 371 aa11.33□□□□□ -0.6
COL6A3-202ENST00000347401 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
COL6A3-202ENST00000347401 WDR82Q6UXN9 313 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 WNT2BQ93097 391 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 KIAA1549LQ6ZVL6 1849 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 H3BUT2 72 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 C1orf162Q8NEQ5 155 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-202ENST00000347401 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 R4GN57 208 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 TRBV20-1A0A075B6N2 111 aa11.32□□□□□ -0.6
COL6A3-202ENST00000347401 OTX1P32242 354 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-202ENST00000347401 OR9G9P0C7N8 305 aa11.31□□□□□ -0.6
COL6A3-202ENST00000347401 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
COL6A3-202ENST00000347401 UMODP07911 640 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms