RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 A8MWV9 139 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 SLC25A53Q5H9E4 307 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 Q6AWC8 147 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 CDPF1Q6NVV7 123 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF501Q96CX3 271 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-202ENST00000345356 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
COL12A1-202ENST00000345356 GUSBP1Q15486 140 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 ECSCRQ19T08 205 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 ASCL5Q7RTU5 278 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 DMRTC2Q8IXT2 367 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-202ENST00000345356 FADS6Q8N9I5 356 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 CT55Q8WUE5 264 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 A0A0G2JMM0 328 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 A0A1W2PPB8 328 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 KIR3DP1A8MWS1 328 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 C16orf92Q96LL3 132 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 ANKRD36A6QL64 1941 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 TRAV24A0A0B4J272 114 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 IGKV3-11P04433 115 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 CCL4P13236 92 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 SPSB3Q6PJ21 355 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 C1RLQ9NZP8 487 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 RABAC1Q9UI14 185 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 STPG1Q5TH74 334 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 BCL6BQ8N143 479 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-202ENST00000345356 OR10J6PQ8NGY7 276 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF703Q9H7S9 590 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-202ENST00000345356 FSCN3Q9NQT6 498 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 CABIN1Q9Y6J0 2220 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 SYNGR3O43761 229 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 DPM2O94777 84 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 PRR31Q5SQ13 230 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 TSKUQ8WUA8 353 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 COQ2Q96H96 371 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 EFNB3Q15768 340 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
COL12A1-202ENST00000345356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 FAM166AQ6J272 317 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 WDR83OSQ9Y284 106 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 A0A1W2PQF6 199 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 SH2D7A6NKC9 451 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 FOXI3A8MTJ6 420 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 ATG2BQ96BY7 2078 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF236Q9UL36 1845 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 LOC105371242A0A075B767 164 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 PPIAL4CA0A0B4J2A2 164 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 DNAL4O96015 105 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 LYZL4Q96KX0 146 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 COL11A1P12107 1806 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 TRAV5A0A0B4J249 113 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 A0A1W2PQM1 296 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 RAMP3O60896 148 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 RTN4RL2Q86UN3 420 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 SLC22A18ASQ8N1D0 253 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 Q9H3A6 140 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF319Q9P2F9 582 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 QSER1Q2KHR3 1735 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-202ENST00000345356 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
COL12A1-202ENST00000345356 IGHV5-10-1A0A0J9YXX1 117 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 TGFBR3LH3BV60 316 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 WNT9BO14905 357 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 CCL1P22362 96 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 ADAMTSL5Q6ZMM2 481 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 CIARTQ8N365 385 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-202ENST00000345356 ITLN1Q8WWA0 313 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 TPRP12270 2363 aaKnown RBP10.16□□□□□ -0.78
COL12A1-202ENST00000345356 TRGV8A0A0C4DH27 118 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 VKORC1Q9BQB6 163 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 NPIPB6E9PJ23 425 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 PFN1P07737 140 aaKnown RBP10.16□□□□□ -0.78
COL12A1-202ENST00000345356 CCL8P80075 99 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 TTTY12Q9BZ98 90 aa10.16□□□□□ -0.78
COL12A1-202ENST00000345356 IGKCP01834 107 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 TEX45Q8NA69 505 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 CFHR5Q9BXR6 569 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 MFAP4P55083 255 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 MEIG1Q5JSS6 88 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 C9JCJ5 164 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 PYYP10082 97 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 C19orf54Q5BKX5 351 aa10.15□□□□□ -0.78
COL12A1-202ENST00000345356 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms