RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 TECRQ9NZ01 308 aaKnown RBP18.89■□□□□ 0.61
NKX2-3-201ENST00000344586 M0R296 226 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 TDGF1P3P51864 188 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 TDRG1Q3Y452 100 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 STUMQ69YW2 141 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 BAGE3Q86Y29 109 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 BAGE2Q86Y30 109 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 SLC35E1Q96K37 410 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 PRRC2CQ9Y520 2896 aaKnown RBP18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 GGTLC3B5MD39 225 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 IGKV1-16P04430 117 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 GATA2P23769 480 aaPredicted RBP18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 GLRXP35754 106 aa18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 RNASE7Q9H1E1 156 aaKnown RBP18.88■□□□□ 0.61
NKX2-3-201ENST00000344586 DSPP15924 2871 aaKnown RBP18.87■□□□□ 0.61
NKX2-3-201ENST00000344586 MMP23AO75900 390 aa18.87■□□□□ 0.61
NKX2-3-201ENST00000344586 GAFA1Q96PS6 74 aa18.87■□□□□ 0.61
NKX2-3-201ENST00000344586 C20orf144Q9BQM9 153 aa18.87■□□□□ 0.61
NKX2-3-201ENST00000344586 DSCAML1Q8TD84 2053 aa18.87■□□□□ 0.61
NKX2-3-201ENST00000344586 MBD3L4A6NDZ8 208 aaPredicted RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 MBD3L3A6NE82 208 aaPredicted RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 MBD3L5A6NJ08 208 aaPredicted RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 SRRM4A7MD48 611 aaKnown RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 OR5G3P0C626 314 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 CT45A6P0DMU7 189 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 CT45A5P0DMU8 189 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 CT45A7P0DMV0 189 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 GATA4P43694 442 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 CX3CL1P78423 397 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 ZNF124Q15973 351 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 OR5AU1Q8NGC0 362 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 MBD3L2Q8NHZ7 208 aaPredicted RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 PARD6AQ9NPB6 346 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 IGLV3-9A0A075B6K5 115 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 OR7C2O60412 319 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 COMPP49747 757 aaPredicted RBP18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 GNB4Q9HAV0 340 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 GCM1Q9NP62 436 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 ZNRD1Q9P1U0 126 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 RNF7Q9UBF6 113 aa18.86■□□□□ 0.61
NKX2-3-201ENST00000344586 INTS1Q8N201 2190 aaKnown RBP18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 DSCAMO60469 2012 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 TEX50A0A1B0GTY4 177 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 FXYD3Q14802 87 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 C2orf83Q53S99 150 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 TIMM23BQ5SRD1 257 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 LINC00574Q9H8X3 128 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 OSTCQ9NRP0 149 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 RAI1Q7Z5J4 1906 aaPredicted RBP18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 HEATR1Q9H583 2144 aaKnown RBP18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 ZNF474Q6S9Z5 364 aaPredicted RBP18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 TMEM136Q6ZRR5 245 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 SLC25A48Q6ZT89 311 aaKnown RBP18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 PNKDQ8N490 385 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 FAM216BQ8N7L0 139 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 SAMD10Q9BYL1 202 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 SLC35D1Q9NTN3 355 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 RNF114Q9Y508 228 aa18.85■□□□□ 0.61
NKX2-3-201ENST00000344586 TANC2Q9HCD6 1990 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 SPINK4O60575 86 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 IGLV2-8P01709 118 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 ZNF705AQ6ZN79 300 aaPredicted RBP18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 DEFB108BQ8NET1 73 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 OR9G1Q8NH87 305 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 IGF2BP2-AS1Q96M15 143 aa18.84■□□□□ 0.61
NKX2-3-201ENST00000344586 MT-ND6P03923 174 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 RNASE2P10153 161 aaKnown RBP18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 MLANAQ16655 118 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 RTL8BQ17RB0 113 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 TMEM183BQ1AE95 376 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 TIGITQ495A1 244 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 VN1R17PQ8TDU5 208 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 CCL13Q99616 98 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 NAT8BQ9UHF3 227 aa18.83■□□□□ 0.61
NKX2-3-201ENST00000344586 SAA1P0DJI8 122 aaPredicted RBP18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 TAS2R45P59539 299 aa18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 WDR73Q6P4I2 378 aa18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 MIEN1Q9BRT3 115 aa18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 RPUSD1Q9UJJ7 312 aaKnown RBP18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 FBXL7Q9UJT9 491 aa18.83■□□□□ 0.6
NKX2-3-201ENST00000344586 ISLRO14498 428 aa18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 TCL1AP56279 114 aa18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 OR1L8Q8NGR8 309 aa18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 SNRNP40Q96DI7 357 aaKnown RBP18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 C19orf24Q9BVV8 132 aa18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 BET1LQ9NYM9 111 aa18.82■□□□□ 0.6
NKX2-3-201ENST00000344586 IGHV1-46P01743 117 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 TNFAIP6P98066 277 aaPredicted RBP18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 MRPL52Q86TS9 123 aaKnown RBP18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 PAM16Q9Y3D7 125 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 A0A1W2PRE2 83 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 FOSL1P15407 271 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 PPOXP50336 477 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 ATP5IP56385 69 aaPredicted RBP18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 SUMO1P63165 101 aaKnown RBP18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 SLC35B1P78383 322 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 ZNF788Q6ZQV5 615 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 OR10W1Q8NGF6 305 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 OR5B3Q8NH48 314 aa18.81■□□□□ 0.6
NKX2-3-201ENST00000344586 SLC25A33Q9BSK2 321 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms