RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 FOLR2P14207 255 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 CSRP3P50461 194 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 C2orf88Q9BSF0 95 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
UBE3B-202ENST00000342494 EFNA4P52798 201 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 FOXF2Q12947 444 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 RHOGP84095 191 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 SPATA45Q537H7 98 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 YPEL1O60688 119 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 PKIAP61925 76 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-202ENST00000342494 ZNF672Q499Z4 452 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-202ENST00000342494 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 IGLV3-32A0A0A0MS00 114 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 IL18BPO95998 194 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 DNAL4O96015 105 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 FHITP49789 147 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-202ENST00000342494 C20orf204Q6ZNR8 217 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 TOMM7Q9P0U1 55 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
UBE3B-202ENST00000342494 TFF3Q07654 80 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 SLC25A28Q96A46 364 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 TGIF2-C20orf24A0A0A6YYL0 155 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 PEX7O00628 323 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 IGHV1-46P01743 117 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 MRPL13Q9BYD1 178 aaKnown RBP12.55□□□□□ -0.4
UBE3B-202ENST00000342494 A0A1B0GTI1 187 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 UPK2O00526 184 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 FAM209BQ5JX69 171 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 TRAV14DV4A0A0A6YYC5 116 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 TDGF1P13385 188 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 GLMPQ8WWB7 406 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 TIMM23O14925 209 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
UBE3B-202ENST00000342494 FABP2P12104 132 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 RCC1LQ96I51 464 aaKnown RBP12.54□□□□□ -0.4
UBE3B-202ENST00000342494 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
UBE3B-202ENST00000342494 TMEM250H0YL14 139 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
UBE3B-202ENST00000342494 LEMD1Q68G75 181 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 SCN2AQ99250 2005 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 TET1Q8NFU7 2136 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 CACNG7P62955 275 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 FAM166AQ6J272 317 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 GRIFINA4D1Z8 144 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 GATA2P23769 480 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-202ENST00000342494 C3orf36Q3SXR2 165 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 FLVCR1-AS1Q8TAF5 88 aa12.54□□□□□ -0.4
UBE3B-202ENST00000342494 OR11H12B2RN74 326 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 TFF1P04155 84 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 FAM71F2Q6NXP2 309 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 PUSL1Q8N0Z8 303 aaKnown RBP12.53□□□□□ -0.4
UBE3B-202ENST00000342494 OR11H1Q8NG94 326 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 OR11H2Q8NH07 326 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 LEPP41159 167 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-202ENST00000342494 MORN2Q502X0 79 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 C12orf54Q6X4T0 127 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 BIVMQ86UB2 503 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 MESP1Q9BRJ9 268 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 TMEM160Q9NX00 188 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 H3BRM9 83 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 CD7P09564 240 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 CIARTQ8N365 385 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-202ENST00000342494 SLC50A1Q9BRV3 221 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 Q9H3A6 140 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 SLC25A34Q6PIV7 304 aa12.53□□□□□ -0.4
UBE3B-202ENST00000342494 BEX4Q9NWD9 120 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-202ENST00000342494 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.4
UBE3B-202ENST00000342494 OR9G9P0C7N8 305 aa12.52□□□□□ -0.4
UBE3B-202ENST00000342494 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.4
UBE3B-202ENST00000342494 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.4
UBE3B-202ENST00000342494 LINC00527Q9UJ94 153 aa12.52□□□□□ -0.4
UBE3B-202ENST00000342494 B4DSR2 109 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 DOPEY2Q9Y3R5 2298 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 CYB5R2Q6BCY4 276 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
UBE3B-202ENST00000342494 CXorf65A6NEN9 183 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms