RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 OR4C46A6NHA9 309 aa14.08□□□□□ -0.15
CDK11B-201ENST00000340677 KLF7O75840 302 aaPredicted RBP14.08□□□□□ -0.15
CDK11B-201ENST00000340677 HIST1H1CP16403 213 aaKnown RBP14.08□□□□□ -0.15
CDK11B-201ENST00000340677 NANOS3P60323 173 aaKnown RBP14.08□□□□□ -0.15
CDK11B-201ENST00000340677 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.15
CDK11B-201ENST00000340677 KIR2DL4Q99706 377 aa14.08□□□□□ -0.15
CDK11B-201ENST00000340677 UBE2G1P62253 170 aa14.08□□□□□ -0.16
CDK11B-201ENST00000340677 OR10J3Q5JRS4 329 aa14.08□□□□□ -0.16
CDK11B-201ENST00000340677 LRTM2Q8N967 370 aa14.08□□□□□ -0.16
CDK11B-201ENST00000340677 HSD17B10Q99714 261 aaKnown RBP14.08□□□□□ -0.16
CDK11B-201ENST00000340677 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.16
CDK11B-201ENST00000340677 A0A1B0GWA3 101 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 TMEM8BA6NDV4 472 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 J3KT08 172 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 DUX3Q96PT4 197 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 ELOVL3Q9HB03 270 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 TRAV24A0A0B4J272 114 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 ZNF732B4DXR9 585 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 ENSAO43768 121 aaKnown RBP14.07□□□□□ -0.16
CDK11B-201ENST00000340677 OR2J3O76001 311 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 MT-CO3P00414 261 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 SNU13P55769 128 aaKnown RBP14.07□□□□□ -0.16
CDK11B-201ENST00000340677 RPS4Y2Q8TD47 263 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 RNF138Q8WVD3 245 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 SGK494Q96LW2 274 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 USP34Q70CQ2 3546 aa14.07□□□□□ -0.16
CDK11B-201ENST00000340677 A0A1W2PRD5 423 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 A0A1W2PRF3 423 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 A0A1W2PRM7 423 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 FAM181BA6NEQ2 426 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 NPIPB13A6NJU9 1138 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 NPIPB4C9JG80 1138 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 ZFAND5O76080 213 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 HLA-DQA2P01906 255 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 RASL11AQ6T310 242 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 ZNF808Q8N4W9 903 aaPredicted RBP14.06□□□□□ -0.16
CDK11B-201ENST00000340677 LOC102725191A0A1B0GVB3 256 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 FCN1O00602 326 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 CXorf1O96002 111 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 SP1P08047 785 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 EWSR1Q01844 656 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK11B-201ENST00000340677 FOXI1Q12951 378 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 OR13A1Q8NGR1 328 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 SIGLEC8Q9NYZ4 499 aa14.06□□□□□ -0.16
CDK11B-201ENST00000340677 DKK1O94907 266 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 EMP1P54849 157 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 PCOLCEQ15113 449 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 MBNL2Q5VZF2 373 aaKnown RBP14.05□□□□□ -0.16
CDK11B-201ENST00000340677 LIN7CQ9NUP9 197 aaKnown RBP14.05□□□□□ -0.16
CDK11B-201ENST00000340677 IGHV3-20A0A0C4DH32 117 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 IGHG3P01860 377 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 DAP3P51398 398 aaKnown RBP14.05□□□□□ -0.16
CDK11B-201ENST00000340677 GNG5P63218 68 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 BPIFA4PQ86YQ2 179 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 OR6K6Q8NGW6 343 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 KCNS2Q9ULS6 477 aa14.05□□□□□ -0.16
CDK11B-201ENST00000340677 FAM106CPP0CH98 169 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 IFITM1P13164 125 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 NBL1P41271 181 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 FOLR3P41439 243 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 FAM106AQ4KMX7 169 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 ZPLD1Q8TCW7 415 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 IMMP1LQ96LU5 166 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 PRELID3AQ96N28 172 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 LINC01587Q99440 93 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 EDA2RQ9HAV5 297 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 GPR179Q6PRD1 2367 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 IGHV1-45A0A0A0MS14 117 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 C2orf70A6NJV1 201 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 CEACAM18A8MTB9 384 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 CELA2AP08217 269 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 CFPP27918 469 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 C3AR1Q16581 482 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
CDK11B-201ENST00000340677 MRPL24Q96A35 216 aaKnown RBP14.04□□□□□ -0.16
CDK11B-201ENST00000340677 PCNX2A6NKB5 2137 aa14.04□□□□□ -0.16
CDK11B-201ENST00000340677 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 PRR32B1ATL7 298 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 TIMM8AO60220 97 aaPredicted RBP14.03□□□□□ -0.16
CDK11B-201ENST00000340677 PRKNO60260 465 aaPredicted RBP14.03□□□□□ -0.16
CDK11B-201ENST00000340677 G6PCP35575 357 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 MFGE8Q08431 387 aaPredicted RBP14.03□□□□□ -0.16
CDK11B-201ENST00000340677 LINC00477Q96M19 166 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 APOMO95445 188 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 RNPS1Q15287 305 aaKnown RBP14.03□□□□□ -0.16
CDK11B-201ENST00000340677 LSM10Q969L4 123 aaKnown RBP14.03□□□□□ -0.16
CDK11B-201ENST00000340677 C18orf15Q96N68 181 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 CACNA1HO95180 2353 aa14.03□□□□□ -0.16
CDK11B-201ENST00000340677 SLC17A2O00624 439 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 H2BFMP0C1H6 154 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 COX6A1P12074 109 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 PTGDSP41222 190 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 TRIP6Q15654 476 aaKnown RBP14.02□□□□□ -0.16
CDK11B-201ENST00000340677 TTC32Q5I0X7 151 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 OR1F12Q8NHA8 337 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 TMEM171Q8WVE6 324 aa14.02□□□□□ -0.16
CDK11B-201ENST00000340677 NMNAT3Q96T66 252 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms