RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
RRP1B-201ENST00000340648 FABP2P12104 132 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 EFNB3Q15768 340 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 ZNF71Q9NQZ8 489 aaPredicted RBP12.4□□□□□ -0.42
RRP1B-201ENST00000340648 SNRNP200O75643 2136 aaKnown RBP12.4□□□□□ -0.42
RRP1B-201ENST00000340648 C16orf97H3BN30 126 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 LIPFP07098 398 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 CD40P25942 277 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM14EPQ6UXP3 125 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 BEND2Q8NDZ0 799 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 GUCD1Q96NT3 240 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
RRP1B-201ENST00000340648 CEP250Q9BV73 2442 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 KLF7O75840 302 aaPredicted RBP12.4□□□□□ -0.43
RRP1B-201ENST00000340648 TNFSF13O75888 250 aa12.4□□□□□ -0.43
RRP1B-201ENST00000340648 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.43
RRP1B-201ENST00000340648 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.43
RRP1B-201ENST00000340648 IQCF6A8MYZ5 107 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 CD3EP07766 207 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
RRP1B-201ENST00000340648 HIGD1CA8MV81 97 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 TMEM50AO95807 157 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 IGHV1-2P23083 117 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 ZNF841Q6ZN19 808 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 FCGR2BP31994 310 aaPredicted RBP12.39□□□□□ -0.43
RRP1B-201ENST00000340648 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 AGMATQ9BSE5 352 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 AP5S1Q9NUS5 200 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 SPTA1P02549 2419 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 NBEAP1P0C6P0 100 aa12.39□□□□□ -0.43
RRP1B-201ENST00000340648 FOXL1Q12952 345 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 SPATA31B1PQ5VZV4 182 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 SLC25A33Q9BSK2 321 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 KLF2Q9Y5W3 355 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-201ENST00000340648 LILRA1O75019 489 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
RRP1B-201ENST00000340648 C20orf204Q6ZNR8 217 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 ALKBH7Q9BT30 221 aaPredicted RBP12.38□□□□□ -0.43
RRP1B-201ENST00000340648 ESPL1Q14674 2120 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 FAM216BQ8N7L0 139 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 ICE1Q9Y2F5 2266 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 AHRRA9YTQ3 701 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 DUTP33316 252 aaKnown RBP12.38□□□□□ -0.43
RRP1B-201ENST00000340648 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 GGTLC1Q9BX51 225 aa12.38□□□□□ -0.43
RRP1B-201ENST00000340648 GNG5P63218 68 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 SAA2-SAA4A0A096LPE2 208 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 A8MWP6 167 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 DLEU1O43261 78 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 STAG3L2P0CL84 134 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 STAG3L3P0CL85 134 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
RRP1B-201ENST00000340648 LGALS7P47929 136 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 GNB1LQ9BYB4 327 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 C15orf61A6NNL5 157 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 PSPNO60542 156 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 ATP5IP56385 69 aaPredicted RBP12.37□□□□□ -0.43
RRP1B-201ENST00000340648 MORN2Q502X0 79 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 WDR82Q6UXN9 313 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 RAB1CQ92928 201 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 MRPS18CQ9Y3D5 142 aaKnown RBP12.37□□□□□ -0.43
RRP1B-201ENST00000340648 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 C1orf185Q5T7R7 199 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
RRP1B-201ENST00000340648 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
RRP1B-201ENST00000340648 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 IGKV3-7A0A075B6H7 116 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 MGPP08493 103 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 TCF24Q7RTU0 167 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 DCAF16Q9NXF7 216 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 PYYP10082 97 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 ASCL4Q6XD76 172 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 RPP21Q9H633 154 aaKnown RBP12.36□□□□□ -0.43
RRP1B-201ENST00000340648 IGKV1-6A0A0C4DH72 117 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 IL15RAQ13261 267 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
RRP1B-201ENST00000340648 LINC00205P59089 165 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 PRR31Q5SQ13 230 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 ZNF788Q6ZQV5 615 aa12.36□□□□□ -0.43
RRP1B-201ENST00000340648 DOCK9Q9BZ29 2069 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 GOSR1O95249 250 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
RRP1B-201ENST00000340648 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 ECSCRQ19T08 205 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 NIT1Q86X76 327 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 TANC1Q9C0D5 1861 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 IGHV2OR16-5A0A0B4J2B6 119 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 FOXF2Q12947 444 aa12.35□□□□□ -0.43
RRP1B-201ENST00000340648 OR52E5Q8NH55 327 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms