RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 OR51M1Q9H341 326 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 ZNF503-AS2A6NEH8 195 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 F8VVB4 439 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 F8VWA3 439 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 IGHV2-5P01817 119 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 CX3CL1P78423 397 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 FAM162BQ5T6X4 162 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 LINC00305Q7Z4B0 112 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 ZNF600Q6ZNG1 722 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 NKX6-2Q9C056 277 aaPredicted RBP10.53□□□□□ -0.72
LIN54-201ENST00000340417 IGLV3-9A0A075B6K5 115 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 ZNF79Q15937 498 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 ZNF343Q6P1L6 599 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 Q6ZR03 302 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
LIN54-201ENST00000340417 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
LIN54-201ENST00000340417 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
LIN54-201ENST00000340417 RND3P61587 244 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
LIN54-201ENST00000340417 DKK1O94907 266 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 NTF3P20783 257 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 RIGQ13278 110 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 TCTE3Q8IZS6 198 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 CAMPP49913 170 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 TMEM42Q69YG0 159 aa10.52□□□□□ -0.72
LIN54-201ENST00000340417 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 FAM120AOSQ5T036 256 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 LHFPL4Q7Z7J7 247 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 FOXI3A8MTJ6 420 aaPredicted RBP10.52□□□□□ -0.73
LIN54-201ENST00000340417 CD74P04233 296 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 ATP6V0CP27449 155 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 MEOX2P50222 304 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 NABP2Q9BQ15 211 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 PCP4L1A6NKN8 68 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 USMG5Q96IX5 58 aa10.52□□□□□ -0.73
LIN54-201ENST00000340417 NTF4P34130 210 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 MFAP2P55001 183 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 RUNX1Q01196 453 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
LIN54-201ENST00000340417 A0A0B4J293 547 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 RAB19A4D1S5 217 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 C15orf61A6NNL5 157 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 ERVK11-1P61568 191 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 SERF2P84101 59 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 FOXL1Q12952 345 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 PRSS8Q16651 343 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 BIVMQ86UB2 503 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIN54-201ENST00000340417 TRGV2A0A075B6R0 118 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 PDE6DO43924 150 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 DENND4CQ5VZ89 1909 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 SELENOKQ9Y6D0 94 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 DHRS11Q6UWP2 260 aa10.51□□□□□ -0.73
LIN54-201ENST00000340417 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
LIN54-201ENST00000340417 CBY3A6NI87 242 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 PLA2G10O15496 165 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.73
LIN54-201ENST00000340417 OBSL1O75147 1896 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 C19orf84I3L1E1 186 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 DEFB112Q30KQ8 113 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 LAIR2Q6ISS4 152 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 Q6P435 159 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 BEND2Q8NDZ0 799 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 COQ2Q96H96 371 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 C19orf24Q9BVV8 132 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 HMSDA8MTL9 139 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 OR2D3Q8NGH3 330 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 MPZP25189 248 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 FAM210BQ96KR6 192 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 BET1LQ9NYM9 111 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 RAMP3O60896 148 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
LIN54-201ENST00000340417 RPL35AP18077 110 aaKnown RBP10.5□□□□□ -0.73
LIN54-201ENST00000340417 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
LIN54-201ENST00000340417 UCP1P25874 307 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 SEM1Q6ZVN7 128 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 CACNG8Q8WXS5 425 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 GPR82Q96P67 336 aa10.49□□□□□ -0.73
LIN54-201ENST00000340417 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms