RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 UFC1Q9Y3C8 167 aa9.96□□□□□ -0.82
NUDCD3-201ENST00000338427 FAM25AB3EWG3 89 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 FAM25CB3EWG5 89 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 FAM25GB3EWG6 89 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 CTSGP08311 255 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 Q56UQ5 140 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 TMEM190Q8WZ59 177 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 BORCS5Q969J3 196 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 MRGPRFQ96AM1 343 aa9.95□□□□□ -0.82
NUDCD3-201ENST00000338427 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 LOC102724200A0A096LPH7 203 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 SMIM18P0DKX4 95 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 RORCP51449 518 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 ELLP55199 621 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 EWSR1Q01844 656 aaKnown RBP eCLIP9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 ZNF124Q15973 351 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 MARC2Q969Z3 335 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 MISP3Q96FF7 219 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 TMEM14BQ9NUH8 114 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 PRNDQ9UKY0 176 aa9.94□□□□□ -0.82
NUDCD3-201ENST00000338427 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 I3L2K1 104 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 CD3DP04234 171 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 CTSDP07339 412 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 FGF2P09038 288 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 RCVRNP35243 200 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 UCP3P55916 312 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 CTF1Q16619 201 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 MLANAQ16655 118 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 SP6Q3SY56 376 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 GPR107Q5VW38 600 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 H2BFWTQ7Z2G1 175 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 OR4D10Q8NGI6 311 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 BSCL2Q96G97 398 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 TMEM56Q96MV1 263 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 CMTM3Q96MX0 182 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 ABHD1Q96SE0 405 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 SCPEP1Q9HB40 452 aa9.93□□□□□ -0.82
NUDCD3-201ENST00000338427 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 NDUFA4O00483 81 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 MT-CO2P00403 227 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 PGAM2P15259 253 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 TFPI2P48307 235 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 HSPE1P61604 102 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 THOC7Q6I9Y2 204 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 HSD17B13Q7Z5P4 300 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 SLC38A6Q8IZM9 456 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 CADM3Q8N126 398 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 LILRB2Q8N423 598 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 PINX1Q96BK5 328 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 TP53RKQ96S44 253 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 RNF2Q99496 336 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 MIXL1Q9H2W2 232 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 FKBP11Q9NYL4 201 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 EXTL2Q9UBQ6 330 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 SMPXQ9UHP9 88 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 ALMS1Q8TCU4 4167 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 BIRC6Q9NR09 4857 aa9.92□□□□□ -0.82
NUDCD3-201ENST00000338427 A0A0B4J293 547 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 CTDSP2O14595 271 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 TSPAN4O14817 238 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 CYB5BO43169 146 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 YIF1AO95070 293 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 MFAP4P55083 255 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 LHFPL1Q86WI0 220 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 APRG1Q8IVJ8 170 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 OR1P1Q8NH06 330 aa9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 DAZ1Q9NQZ3 744 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-201ENST00000338427 K7EMT4 169 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 CHEK1O14757 476 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 ZNF182P17025 639 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 ETV6P41212 452 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 PPP5CP53041 499 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 PIGPP57054 158 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 PRCDQ00LT1 54 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 LAMTOR1Q6IAA8 161 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 MZT2AQ6P582 158 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 SPSB3Q6PJ21 355 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 GBGT1Q8N5D6 347 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 TSC22D3Q99576 134 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 MRPL36Q9P0J6 103 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-201ENST00000338427 IGHV3-66A0A0C4DH42 116 aa9.89□□□□□ -0.83
NUDCD3-201ENST00000338427 A0A0G2JRQ6 117 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms