RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.54□□□□□ -0.248e-7■■■■□ 20.2
NPHP3-201ENST00000337331 FER1L5A0AVI2 2057 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 A0A087X0K7 114 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 HLA-DRB1P01911 266 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 CRYBB3P26998 211 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 GPR183P32249 361 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 PSG9Q00887 426 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 LRTM2Q8N967 370 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 PAXXQ9BUH6 204 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-201ENST00000337331 TMSB15BA0A087X1C1 80 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 PRR33A8MZF0 331 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 ATP1A1-AS1Q5TC04 95 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 hCG_38984A0A1B0GV85 526 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 TFF3Q07654 80 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 KRTCAP3Q53RY4 240 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF788Q6ZQV5 615 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 TM2D1Q9BX74 207 aa13.54□□□□□ -0.24
NPHP3-201ENST00000337331 EFEMP2O95967 443 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 UCP1P25874 307 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 FAM89BQ8N5H3 189 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 FER1L6-AS1Q8NA97 138 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 ZDHHC16Q969W1 377 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 CYYR1Q96J86 154 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 PI4KAP42356 2102 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 SAP30O75446 220 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 CA1P00915 261 aaPredicted RBP13.53□□□□□ -0.24
NPHP3-201ENST00000337331 LMO1P25800 156 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 ABHD12Q8N2K0 398 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
NPHP3-201ENST00000337331 F5H697 171 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 KCNMB1Q16558 191 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 CLEC7AQ9BXN2 247 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 ORM1P02763 201 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 ARF6P62330 175 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 MUC15Q8N387 334 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 MRPL13Q9BYD1 178 aaKnown RBP13.53□□□□□ -0.24
NPHP3-201ENST00000337331 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 CALYQ9NYX4 217 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 UFC1Q9Y3C8 167 aa13.53□□□□□ -0.24
NPHP3-201ENST00000337331 hDV102S1A0JD36 115 aa13.52□□□□□ -0.24
NPHP3-201ENST00000337331 CELA3AP09093 270 aa13.52□□□□□ -0.24
NPHP3-201ENST00000337331 HCP5Q6MZN7 132 aa13.52□□□□□ -0.24
NPHP3-201ENST00000337331 SSTR5P35346 364 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 RPL27AP46776 148 aaKnown RBP13.52□□□□□ -0.25
NPHP3-201ENST00000337331 LSM10Q969L4 123 aaKnown RBP13.52□□□□□ -0.25
NPHP3-201ENST00000337331 AHRRA9YTQ3 701 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 LGALS7P47929 136 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 RIGQ13278 110 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 PRR31Q5SQ13 230 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 RNASE7Q9H1E1 156 aaKnown RBP13.52□□□□□ -0.25
NPHP3-201ENST00000337331 TMEM56-RWDD3S4R434 201 aa13.52□□□□□ -0.25
NPHP3-201ENST00000337331 IGKV3-7A0A075B6H7 116 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 K7EP13 123 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 SYNGR3O43761 229 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 TMEM50AO95807 157 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
NPHP3-201ENST00000337331 CENPWQ5EE01 88 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 ZNF714Q96N38 554 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 YPEL4Q96NS1 127 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 SCRT1Q9BWW7 348 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 C1RLQ9NZP8 487 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 TCF19Q9Y242 345 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 F2Z2F3 143 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 IGLV3-19P01714 112 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
NPHP3-201ENST00000337331 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
NPHP3-201ENST00000337331 CFPP27918 469 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 TIMP3P35625 211 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 RPL8P62917 257 aaKnown RBP13.5□□□□□ -0.25
NPHP3-201ENST00000337331 STPG3Q8N7X2 389 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 SIGLEC12Q96PQ1 595 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 BDP1A6H8Y1 2624 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 WNT9BO14905 357 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 PTGDSP41222 190 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 LHX2P50458 406 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 TYMSP04818 313 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 GCSAMLQ5JQS6 135 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 OR5P3Q8WZ94 311 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 PDLIM4P50479 330 aa13.5□□□□□ -0.25
NPHP3-201ENST00000337331 MTURNQ8N3F0 131 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 A8MWL6 223 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 PLCE1Q9P212 2302 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 J3KRW8 73 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 FTH1P19P0C7X4 201 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 IMMP1LQ96LU5 166 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 SSBP4Q9BWG4 385 aaPredicted RBP13.49□□□□□ -0.25
NPHP3-201ENST00000337331 GP6Q9HCN6 339 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 PRDM6Q9NQX0 595 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 UTRNP46939 3433 aa13.49□□□□□ -0.25
NPHP3-201ENST00000337331 ZNF726P1Q15940 193 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms