RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 FAM90A5PA8MXJ8 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 FAM90A23PA8MXZ1 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 J3QR06 171 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 SMPD2O60906 423 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 FAM90A15PP0C7V4 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 FAM90A13PP0C7W8 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 FAM90A14PP0C7W9 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 FAM90A24PP0C7X0 464 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 TAS2R60P59551 318 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 IL15RAQ13261 267 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 OR4A47Q6IF82 309 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 PDPNQ86YL7 162 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 OR2T6Q8NHC8 308 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 VKORC1Q9BQB6 163 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 HILPDAQ9Y5L2 63 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 CYP2G1PQ6ZSU1 146 aa12.23□□□□□ -0.45
FGFR1-202ENST00000335922 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
FGFR1-202ENST00000335922 VMA21Q3ZAQ7 101 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 IL19Q9UHD0 177 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 P01737 135 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 RPL30P62888 115 aaKnown RBP12.22□□□□□ -0.45
FGFR1-202ENST00000335922 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 TGIF2LYQ8IUE0 185 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 P2RX4Q99571 388 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 INSIG2Q9Y5U4 225 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 HPRT1P00492 218 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 ZNF324BQ6AW86 544 aaPredicted RBP12.22□□□□□ -0.45
FGFR1-202ENST00000335922 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 AMBPP02760 352 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 TFPI2P48307 235 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
FGFR1-202ENST00000335922 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
FGFR1-202ENST00000335922 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
FGFR1-202ENST00000335922 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 IGHV1-69-2A0A0G2JMI3 117 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 MGST3O14880 152 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 PSPNO60542 156 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 SS18L1O75177 396 aaPredicted RBP12.21□□□□□ -0.45
FGFR1-202ENST00000335922 ZNF124Q15973 351 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.45
FGFR1-202ENST00000335922 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 WNK1Q9H4A3 2382 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 K7EM74 188 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.45
FGFR1-202ENST00000335922 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.45
FGFR1-202ENST00000335922 FAM19A2Q8N3H0 131 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 RAB37Q96AX2 223 aa12.21□□□□□ -0.45
FGFR1-202ENST00000335922 PARD6GQ9BYG4 376 aaPredicted RBP12.21□□□□□ -0.45
FGFR1-202ENST00000335922 CEACAM3P40198 252 aa12.21□□□□□ -0.46
FGFR1-202ENST00000335922 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.46
FGFR1-202ENST00000335922 SELENOKQ9Y6D0 94 aa12.21□□□□□ -0.46
FGFR1-202ENST00000335922 A0A087WWC5 75 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
FGFR1-202ENST00000335922 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
FGFR1-202ENST00000335922 RAB7AP51149 207 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 CLEC5AQ9NY25 188 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 CFAP54Q96N23 3096 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 A0A1W2PNU3 283 aaPredicted RBP12.2□□□□□ -0.46
FGFR1-202ENST00000335922 F2RL2O00254 374 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 SMAD7O15105 426 aaKnown RBP12.2□□□□□ -0.46
FGFR1-202ENST00000335922 TNXAQ16473 311 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 TMEM256Q8N2U0 113 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 NDFIP1Q9BT67 221 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 SPEGQ15772 3267 aa12.2□□□□□ -0.46
FGFR1-202ENST00000335922 SNAI2O43623 268 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 B3GALT5-AS1P59052 145 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 PKIBQ9C010 78 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
FGFR1-202ENST00000335922 HIVEP3Q5T1R4 2406 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 ZNF503-AS2A6NEH8 195 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 B9A039 149 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 CGAP01215 116 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 S100A4P26447 101 aaKnown RBP12.19□□□□□ -0.46
FGFR1-202ENST00000335922 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 PROK2Q9HC23 129 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 TCF19Q9Y242 345 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 IFNL4K9M1U5 179 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 SELLP14151 372 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 RELBQ01201 579 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 LHFPL4Q7Z7J7 247 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 A0A0G2JNJ9 132 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 NMUP48645 174 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
FGFR1-202ENST00000335922 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms