RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 IGHV3-72A0A0B4J1Y9 119 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 SCO1O75880 301 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 VENTXO95231 258 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 WT1-ASQ06250 92 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 EBI3Q14213 229 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 ACOT6Q3I5F7 207 aaPredicted RBP10.82□□□□□ -0.68
LMO1-201ENST00000335790 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 SSX7Q7RTT5 188 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 TMEM144Q7Z5S9 345 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 MRPL41Q8IXM3 137 aaKnown RBP10.82□□□□□ -0.68
LMO1-201ENST00000335790 NPBQ8NG41 125 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 OR10W1Q8NGF6 305 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 OR10G4Q8NGN3 311 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
LMO1-201ENST00000335790 C10orf105Q8TEF2 133 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 MGST2Q99735 147 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
LMO1-201ENST00000335790 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 HINT2Q9BX68 163 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 TPSG1Q9NRR2 321 aa10.82□□□□□ -0.68
LMO1-201ENST00000335790 TBL2Q9Y4P3 447 aaKnown RBP10.82□□□□□ -0.68
LMO1-201ENST00000335790 FBN2P35556 2912 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 TIMM23O14925 209 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 CYB5BO43169 146 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 NDUFA3O95167 84 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 HSPB1P04792 205 aaKnown RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 RPL29P47914 159 aaKnown RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 COMPP49747 757 aaPredicted RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 ELLP55199 621 aaPredicted RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 PRB3Q04118 309 aaPredicted RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 CD69Q07108 199 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 KLRD1Q13241 179 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 ICAM4Q14773 271 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 CCDC144NLQ6NUI1 221 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 TEPPQ6URK8 271 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 PIMREGQ9BSJ6 248 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 EIF5A2Q9GZV4 153 aaKnown RBP10.81□□□□□ -0.68
LMO1-201ENST00000335790 SLC39A9Q9NUM3 307 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 CSMD1Q96PZ7 3565 aa10.81□□□□□ -0.68
LMO1-201ENST00000335790 LOC102723971A0A1B0GUV8 181 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 IGLC7A0M8Q6 106 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 YIF1AO95070 293 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 SNAPINO95295 136 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 OPN1MWP04001 364 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
LMO1-201ENST00000335790 OPN1MW2P0DN77 364 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 OPN1MW3P0DN78 364 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 CNTFRP26992 372 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 TAGLN2P37802 199 aaKnown RBP10.8□□□□□ -0.68
LMO1-201ENST00000335790 RPL27AP46776 148 aaKnown RBP10.8□□□□□ -0.68
LMO1-201ENST00000335790 UBE2E1P51965 193 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 SUB1P53999 127 aaKnown RBP eCLIP10.8□□□□□ -0.68
LMO1-201ENST00000335790 LCN2P80188 198 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 PRR20EP86478 221 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 PRR20CP86479 221 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 PRR20DP86480 221 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 PRR20BP86481 221 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 PRR20AP86496 221 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 DEFA5Q01523 94 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 LHFPL4Q7Z7J7 247 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 Q8N6K4 173 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 FAM168AQ92567 244 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 TBX15Q96SF7 602 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 NKX6-2Q9C056 277 aaPredicted RBP10.8□□□□□ -0.68
LMO1-201ENST00000335790 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
LMO1-201ENST00000335790 CELSR2Q9HCU4 2923 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 TOX4O94842 621 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
LMO1-201ENST00000335790 PAX8Q06710 450 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 RAB31Q13636 194 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 P2RX4Q99571 388 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 RARRES2Q99969 163 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 METTL1Q9UBP6 276 aaKnown RBP10.79□□□□□ -0.68
LMO1-201ENST00000335790 SLC45A2Q9UMX9 530 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
LMO1-201ENST00000335790 SMCO3A2RU48 225 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 TSPAN9O75954 239 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 MOSP00540 346 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 CRYGCP07315 174 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 BCL2P10415 239 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 PPT1P50897 306 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 DSCR9P59020 149 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 GAMTQ14353 236 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 LCN15Q6UWW0 184 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 AJUBAQ96IF1 538 aa10.78□□□□□ -0.68
LMO1-201ENST00000335790 EAF1Q96JC9 268 aaPredicted RBP10.78□□□□□ -0.68
LMO1-201ENST00000335790 CRYBG3Q68DQ2 2970 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms