RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SYNGR2O43760 224 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 CD33P20138 364 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 LMO1P25800 156 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 MSI2Q96DH6 328 aaKnown RBP12.98□□□□□ -0.33
PDGFB-201ENST00000331163 HSD17B10Q99714 261 aaKnown RBP12.98□□□□□ -0.33
PDGFB-201ENST00000331163 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
PDGFB-201ENST00000331163 TMEM140Q9NV12 185 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 SPCS3P61009 180 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 SMIM7Q9BQ49 75 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 CLEC7AQ9BXN2 247 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 QTRT1Q9BXR0 403 aaKnown RBP12.98□□□□□ -0.33
PDGFB-201ENST00000331163 HIPK2Q9H2X6 1198 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 FBXL15Q9H469 300 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 IGHV4-30-2A0A087WSY4 118 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 H0Y980 276 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 TMEM219Q86XT9 240 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 OR9G1Q8NH87 305 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 VSIRQ9H7M9 311 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 FUT9Q9Y231 359 aa12.98□□□□□ -0.33
PDGFB-201ENST00000331163 AMBPP02760 352 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 RUSC1-AS1Q66K80 236 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 MBP02144 154 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 GZMBP10144 247 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 HTR1DP28221 377 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 EFNB3Q15768 340 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 UNC79Q9P2D8 2635 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 IL17RELQ6ZVW7 336 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 OR5B12Q96R08 314 aa12.97□□□□□ -0.33
PDGFB-201ENST00000331163 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 PPP5D1E7EU14 171 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 J3QR06 171 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 PRSS8Q16651 343 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 Q8NFD4 153 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 DTD1Q8TEA8 209 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 DUTP33316 252 aaKnown RBP12.96□□□□□ -0.33
PDGFB-201ENST00000331163 OR10A7Q8NGE5 316 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 TMEM133Q9H2Q1 129 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
PDGFB-201ENST00000331163 TEX15Q9BXT5 2789 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 C15orf65H3BRN8 121 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 DFFBO76075 338 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 HRASP01112 189 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 C3orf36Q3SXR2 165 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 ARV1Q9H2C2 271 aa12.96□□□□□ -0.34
PDGFB-201ENST00000331163 CSMD2Q7Z408 3487 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 IGHV3OR16-8A0A075B7F1 116 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 CNTFRP26992 372 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 KHDC1LQ5JSQ8 128 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 YPEL4Q96NS1 127 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
PDGFB-201ENST00000331163 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 F8P00451 2351 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 IGHV2-26A0A0B4J1V2 119 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 CDS2O95674 445 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 TMEM50AO95807 157 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 IGKV1D-33P01593 117 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 IGKV1-33P01594 117 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 IGKV1-5P01602 117 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 C16orf82Q7Z2V1 217 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 SSMEM1Q8WWF3 244 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 HIF1ANQ9NWT6 349 aa12.95□□□□□ -0.34
PDGFB-201ENST00000331163 H7BYZ3 331 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 TIMM23O14925 209 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 ZFP36P26651 326 aaKnown RBP12.94□□□□□ -0.34
PDGFB-201ENST00000331163 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 VMO1Q7Z5L0 202 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 OR10W1Q8NGF6 305 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 PLEKHA3Q9HB20 300 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 HBE1P02100 147 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 HSPB1P04792 205 aaKnown RBP12.94□□□□□ -0.34
PDGFB-201ENST00000331163 UCP1P25874 307 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 UCP3P55916 312 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 SELENOKQ9Y6D0 94 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 A8MWP6 167 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 HNF1AP20823 631 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 CHRNA7P36544 502 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 PPOXP50336 477 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 ECSCRQ19T08 205 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 GNPNAT1Q96EK6 184 aaPredicted RBP12.94□□□□□ -0.34
PDGFB-201ENST00000331163 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 ANAPC10Q9UM13 185 aa12.94□□□□□ -0.34
PDGFB-201ENST00000331163 F2RL2O00254 374 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 CFHR2P36980 270 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 RBKSQ9H477 322 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 YPEL1O60688 119 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 FAM3BP58499 235 aaPredicted RBP12.93□□□□□ -0.34
PDGFB-201ENST00000331163 PAX5Q02548 391 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
PDGFB-201ENST00000331163 SLC35E3Q7Z769 313 aa12.93□□□□□ -0.34
PDGFB-201ENST00000331163 Q8TCH9 128 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms