RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TXNDC17Q9BRA2 123 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 PLAUP00749 431 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 Q6P435 159 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 TCF24Q7RTU0 167 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 C5orf67F2Z3F1 127 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 C3AR1Q16581 482 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 LEAP2Q969E1 77 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 TAAR6Q96RI8 345 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 PRSS47A8MTI9 375 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 CD27P26842 260 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 ALKBH6Q3KRA9 238 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 MOB1BQ7L9L4 216 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 SF3B5Q9BWJ5 86 aaKnown RBP17.03■□□□□ 0.32
CMTM4-201ENST00000330687 OBP2BQ9NPH6 170 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 PEF1Q9UBV8 284 aaKnown RBP17.03■□□□□ 0.32
CMTM4-201ENST00000330687 HIGD1CA8MV81 97 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 MT-CO3P00414 261 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 ARG2P78540 354 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 TRIP6Q15654 476 aaKnown RBP17.03■□□□□ 0.32
CMTM4-201ENST00000330687 FER1L6-AS1Q8NA97 138 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 DUSP13Q9UII6 198 aa17.03■□□□□ 0.32
CMTM4-201ENST00000330687 C9JCJ5 164 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 RPL39P5Q59GN2 51 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 IGHV1OR15-9A0A0B4J2B8 117 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 J3QT63 122 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 HAND1O96004 215 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 SMAGPQ0VAQ4 97 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 GDF5OSQ5U4N7 250 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 SLC25A45Q8N413 288 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 DEFB125Q8N687 156 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 TMEM191AQ9H0A3 160 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 GTSF1LQ9H1H1 148 aa17.02■□□□□ 0.32
CMTM4-201ENST00000330687 SAA2-SAA4A0A096LPE2 208 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 TRAV5A0A0B4J249 113 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 IZUMO1RA6ND01 250 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 C2orf70A6NJV1 201 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 GGTLC3B5MD39 225 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 MLANAQ16655 118 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 CLUHP3Q96NS8 147 aa17.02■□□□□ 0.31
CMTM4-201ENST00000330687 CADP27708 2225 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 TMEM30CPA0ZSE6 113 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 ZNF207O43670 478 aaKnown RBP17.01■□□□□ 0.31
CMTM4-201ENST00000330687 RHOGP84095 191 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 FOXE3Q13461 319 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 NUP35Q8NFH5 326 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 NABP2Q9BQ15 211 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 OSTCQ9NRP0 149 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 OCIAD1Q9NX40 245 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 MRPL49Q13405 166 aaKnown RBP17.01■□□□□ 0.31
CMTM4-201ENST00000330687 GUSBP11Q6P575 273 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 PROK2Q9HC23 129 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 FZR1Q9UM11 496 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 HTR1DP28221 377 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 UBE2L3P68036 154 aaKnown RBP17.01■□□□□ 0.31
CMTM4-201ENST00000330687 CT55Q8WUE5 264 aa17.01■□□□□ 0.31
CMTM4-201ENST00000330687 HCFC1P51610 2035 aa17■□□□□ 0.31
CMTM4-201ENST00000330687 MPDU1O75352 247 aa17■□□□□ 0.31
CMTM4-201ENST00000330687 BHLHA15Q7RTS1 189 aaPredicted RBP17■□□□□ 0.31
CMTM4-201ENST00000330687 KMT2EQ8IZD2 1858 aa17■□□□□ 0.31
CMTM4-201ENST00000330687 SMIM21Q3B7S5 101 aa17■□□□□ 0.31
CMTM4-201ENST00000330687 LRP4O75096 1905 aa17■□□□□ 0.31
CMTM4-201ENST00000330687 GPR183P32249 361 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 LINC00696Q6ZRV3 163 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 BPIFA4PQ86YQ2 179 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 RTL8AQ9BWD3 113 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 H3BTX0 84 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 SYS1-DBNDD2H3BUS1 97 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 SNRNP40Q96DI7 357 aaKnown RBP16.99■□□□□ 0.31
CMTM4-201ENST00000330687 TCF19Q9Y242 345 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 GGNQ86UU5 652 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 CHRNA10Q9GZZ6 450 aa16.99■□□□□ 0.31
CMTM4-201ENST00000330687 DSPP15924 2871 aaKnown RBP16.99■□□□□ 0.31
CMTM4-201ENST00000330687 EXPH5Q8NEV8 1989 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 FOXF2Q12947 444 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 PGLYRP4Q96LB8 373 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 LTBP2Q14767 1821 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 PLP1P60201 277 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 ARF6P62330 175 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 GNG5P63218 68 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 TBR1Q16650 682 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 OR13A1Q8NGR1 328 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 BLNKQ8WV28 456 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 TPPP3Q9BW30 176 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 LSM4Q9Y4Z0 139 aaKnown RBP16.98■□□□□ 0.31
CMTM4-201ENST00000330687 A0A1W2PR77 199 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 GFRA3O60609 400 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 RNF138Q8WVD3 245 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 TMEM186Q96B77 213 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 POM121L2Q96KW2 1035 aa16.98■□□□□ 0.31
CMTM4-201ENST00000330687 LOC102723996A0A087X1L8 192 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 TRBV6-6A0A0A6YYG2 114 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 ISLRO14498 428 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 PYYP10082 97 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 PCOLCEQ15113 449 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 COX19Q49B96 90 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 SAMD13Q5VXD3 122 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 WDR86Q86TI4 376 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 TEX45Q8NA69 505 aa16.97■□□□□ 0.31
CMTM4-201ENST00000330687 IGLV3-12A0A075B6K2 115 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms