RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FABP6P51161 128 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 OR1C1Q15619 314 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 ADIPOQQ15848 244 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 OR5AN1Q8NGI8 311 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 ASCL3Q9NQ33 180 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 UQCR10Q9UDW1 63 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 MBD3L4A6NDZ8 208 aaPredicted RBP6.52□□□□□ -1.37
VMA21-201ENST00000330374 MBD3L3A6NE82 208 aaPredicted RBP6.52□□□□□ -1.37
VMA21-201ENST00000330374 OOEPA6NGQ2 149 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 MPV17P39210 176 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 GPR6P46095 362 aaPredicted RBP6.52□□□□□ -1.37
VMA21-201ENST00000330374 ARG2P78540 354 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 TBC1D28Q2M2D7 210 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 HES3Q5TGS1 186 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 PRR27Q6MZM9 219 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 BOD1L1Q8NFC6 3051 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 OPRK1P41145 380 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 ERVK-16P61578 105 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 LPAL2Q16609 132 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 SGK494Q96LW2 274 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 CITED1Q99966 193 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 V9GYV3 84 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 YLPM1P49750 1951 aaKnown RBP6.52□□□□□ -1.37
VMA21-201ENST00000330374 PCNX2A6NKB5 2137 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 H0Y8G0 127 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 IGLC2P0DOY2 106 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 CD69Q07108 199 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 VWC2Q2TAL6 325 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 ZNF718Q3SXZ3 478 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
VMA21-201ENST00000330374 RHOBP62745 196 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TIGITQ495A1 244 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 ABHD17BQ5VST6 288 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 Q8IYB0 196 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 Q8N976 141 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 SELENOKQ9Y6D0 94 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 K7ESF4 209 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TDGF1P13385 188 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 UTF1Q5T230 341 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 SPEM1Q8N4L4 309 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 Q8TCH9 128 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 GMPPAQ96IJ6 420 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 KCNS1Q96KK3 526 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 JMJD8Q96S16 334 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 LINC00470Q9BZP3 86 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 B4GALT7Q9UBV7 327 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 ZNF324O75467 553 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 USF1P22415 310 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 CEACAM8P31997 349 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 ERVK11-1P61568 191 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 ZNF146Q15072 292 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 PMCHL1Q16048 86 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TMEM251Q8N6I4 163 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TMEM116Q8NCL8 245 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 CT55Q8WUE5 264 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 FER1L6-AS2Q96M78 137 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TTTY12Q9BZ98 90 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 UBTD1Q9HAC8 227 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 IGHV3OR15-7A0A075B7D8 119 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 IGKV3D-15A0A087WSY6 115 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 SS18L1O75177 396 aaPredicted RBP6.51□□□□□ -1.37
VMA21-201ENST00000330374 S100A7P31151 101 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 VAMP3Q15836 100 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 MLANAQ16655 118 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TEPPQ6URK8 271 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 FAM168AQ92567 244 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 TCF19Q9Y242 345 aa6.51□□□□□ -1.37
VMA21-201ENST00000330374 BMPR1BO00238 502 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 SPINT2O43291 252 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 GFRA3O60609 400 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 HSBP1O75506 76 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 MT-CO2P00403 227 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 CA2P00918 260 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 IGHV3-48P01763 117 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 FBXW9Q5XUX1 488 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 LEMD1Q68G75 181 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 STUMQ69YW2 141 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 TMEM136Q6ZRR5 245 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 RAB1CQ92928 201 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 CLEC7AQ9BXN2 247 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 NPVFQ9HCQ7 196 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 PROP1O75360 226 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 APCSP02743 223 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 CD24P25063 80 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 Q0VG73 95 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 TRIP6Q15654 476 aaKnown RBP6.5□□□□□ -1.37
VMA21-201ENST00000330374 NRN1LQ496H8 165 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 IBA57Q5T440 356 aaKnown RBP6.5□□□□□ -1.37
VMA21-201ENST00000330374 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
VMA21-201ENST00000330374 ZNF331Q9NQX6 463 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms