RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TMEM167AQ8TBQ9 72 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 COA4Q9NYJ1 87 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 MTFP1Q9UDX5 166 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 DHFRP00374 187 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 OR9G9P0C7N8 305 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 PGAM2P15259 253 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 F2RP25116 425 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 UCP3P55916 312 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 TAS2R19P59542 299 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 Q6ZR54 194 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 PUSL1Q8N0Z8 303 aaKnown RBP10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 MCFD2Q8NI22 146 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 DGCR14Q96DF8 476 aaKnown RBP10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 ABHD1Q96SE0 405 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 BET1LQ9NYM9 111 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 KLK11Q9UBX7 282 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 RSL24D1Q9UHA3 163 aaKnown RBP10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 SELENOKQ9Y6D0 94 aa10.84□□□□□ -0.67
CTHRC1-201ENST00000330295 M0QYG6 137 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 BMPR1BO00238 502 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 RAB3DO95716 219 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 RLN1P04808 185 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 P0DMU3 169 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 FCGR2BP31994 310 aaPredicted RBP10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 RPL27AP46776 148 aaKnown RBP10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 MEF2DQ14814 521 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 TMEM229BQ8NBD8 167 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 FYTTD1Q96QD9 318 aaKnown RBP10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 RARRES2Q99969 163 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 COMMD5Q9GZQ3 224 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 MIXL1Q9H2W2 232 aa10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
CTHRC1-201ENST00000330295 CTDSPLO15194 276 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 CYB5BO43169 146 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 SNAPC5O75971 98 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 CD3DP04234 171 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 HLA-GP17693 338 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 S100A5P33763 92 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 PHLDA2Q53GA4 152 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM209BQ5JX69 171 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 OR4A47Q6IF82 309 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM212BQ9NTI7 297 aaPredicted RBP10.82□□□□□ -0.68
CTHRC1-201ENST00000330295 FABP12A6NFH5 140 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 ATG12O94817 140 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 S1PR2O95136 353 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 SERPINE2P07093 398 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 FGF2P09038 288 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 APELAP0DMC3 54 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 LPAR6P43657 344 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 BRWD1-AS2P59051 145 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 ZNF57Q68EA5 555 aaPredicted RBP10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 CCDC71LQ8N9Z2 235 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 TERB2Q8NHR7 220 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 SMIM4Q8WVI0 70 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 TSC22D3Q99576 134 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 SLIRPQ9GZT3 109 aaKnown RBP10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 SLC2A9Q9NRM0 540 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
CTHRC1-201ENST00000330295 IGLV2-18A0A075B6J9 118 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM223BA6NKX1 122 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 ZNF701M0R085 212 aaPredicted RBP10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 UPK2O00526 184 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 DEFA4P12838 97 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 ATP5G2Q06055 141 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 SCGB2B2Q4G0G5 96 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 THOC7Q6I9Y2 204 aaKnown RBP10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 FAM223AQ8IWN6 122 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 CADM3Q8N126 398 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 ADAD2Q8NCV1 583 aaKnown RBP10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 CACNG8Q8WXS5 425 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 SRSF8Q9BRL6 282 aaKnown RBP10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 FKBP11Q9NYL4 201 aa10.8□□□□□ -0.68
CTHRC1-201ENST00000330295 MARCH11A6NNE9 402 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 DEFB4AO15263 64 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 KRASP01116 189 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 CD74P04233 296 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 AKAIN1P0CW23 69 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms