RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 S100A2P29034 98 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 HSPE1P61604 102 aaKnown RBP8.68□□□□□ -1.02
CUL4A-201ENST00000326335 LINC00479Q96M42 142 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 OR5B12Q96R08 314 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 RPUSD1Q9UJJ7 312 aaKnown RBP8.68□□□□□ -1.02
CUL4A-201ENST00000326335 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 ACANP16112 2415 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 RAB7AP51149 207 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 KLF17Q5JT82 389 aaPredicted RBP8.68□□□□□ -1.02
CUL4A-201ENST00000326335 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 CNIH1O95406 144 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 NPPCP23582 126 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 GALR1P47211 349 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 ZNF90Q03938 601 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 NPIPB3Q92617 1050 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 GAL3ST2Q9H3Q3 398 aa8.68□□□□□ -1.02
CUL4A-201ENST00000326335 TRAV34A0A0B4J273 112 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 BTBD17A6NE02 478 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 IGHV3-23P01764 117 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 PYYP10082 97 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 UQCRFS1P47985 274 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 SUMO1P63165 101 aaKnown RBP8.67□□□□□ -1.02
CUL4A-201ENST00000326335 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 C1QL4Q86Z23 238 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 FBXL15Q9H469 300 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 FUT9Q9Y231 359 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 C15orf61A6NNL5 157 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 CLDN34H7C241 214 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 CD33P20138 364 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 MORN5Q5VZ52 161 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 NGBQ9NPG2 151 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 TEX50A0A1B0GTY4 177 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 ZNF320A2RRD8 509 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
CUL4A-201ENST00000326335 CA1P00915 261 aaPredicted RBP8.67□□□□□ -1.02
CUL4A-201ENST00000326335 RPL23P62829 140 aaKnown RBP8.67□□□□□ -1.02
CUL4A-201ENST00000326335 EIF4EBP1Q13541 118 aaPredicted RBP8.67□□□□□ -1.02
CUL4A-201ENST00000326335 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 FAM90A26D6RGX4 464 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 F2RL2O00254 374 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 CLN5O75503 358 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 KBTBD11O94819 623 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 CRYBB3P26998 211 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 MEOX2P50222 304 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 TRAT1Q6PIZ9 186 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 NEIL1Q96FI4 390 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 PSMG3Q9BT73 122 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 UBTD1Q9HAC8 227 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 SDF2L1Q9HCN8 221 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 YTHDF2Q9Y5A9 579 aaKnown RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 AREGP15514 252 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RPL8P62917 257 aaKnown RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 NHLH1Q02575 133 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 SSX2Q16385 188 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RUSC1-AS1Q66K80 236 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 HEPN1Q6WQI6 88 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 ZNF430Q9H8G1 570 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 NPVFQ9HCQ7 196 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 ZNF729A6NN14 1252 aaPredicted RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 SIAH2O43255 324 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 P0C879 139 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RND2P52198 227 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
CUL4A-201ENST00000326335 RAB31Q13636 194 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 C9orf152Q5JTZ5 239 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 INSIG2Q9Y5U4 225 aa8.66□□□□□ -1.02
CUL4A-201ENST00000326335 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 VDAC2P45880 294 aaPredicted RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 EFNB3Q15768 340 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 COA4Q9NYJ1 87 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 NCBP2LA6PVI3 153 aaKnown RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 LY86O95711 162 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
CUL4A-201ENST00000326335 PPP5D1E7EU14 171 aa8.65□□□□□ -1.03
CUL4A-201ENST00000326335 AP4M1O00189 453 aa8.65□□□□□ -1.03
CUL4A-201ENST00000326335 KIAA1644Q3SXP7 199 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms