RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 VDAC2P45880 294 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 OR10X1Q8NGY0 326 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 SLC45A2Q9UMX9 530 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 PRB4P10163 310 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 STUMQ69YW2 141 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 C1orf229Q6ZS94 237 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 SLC35E1Q96K37 410 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 NOL4LQ96MY1 436 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 REG1AP05451 166 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 CCL3L1P16619 93 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 RAB9BQ9NP90 201 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 TUBG2Q9NRH3 451 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 TRAV34A0A0B4J273 112 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 APOA2P02652 100 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 KRTCAP3Q53RY4 240 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 RBMXL3Q8N7X1 1067 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
HMGCS1-201ENST00000325110 KBTBD11-OT1A0A1B0GTJ5 212 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 F2Z2F3 143 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 ZNF253O75346 499 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 C10orf55Q5SWW7 151 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 OR5AU1Q8NGC0 362 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 CORO2AQ92828 525 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 COL6A6A6NMZ7 2263 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TRAV5A0A0B4J249 113 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 H3BTX0 84 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 SSTP61278 116 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 EAF1Q96JC9 268 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 VAMP8Q9BV40 100 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TECRQ9NZ01 308 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 IDI2-AS1Q9NZ38 188 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TLN1Q9Y490 2541 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 AHRRA9YTQ3 701 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 COX7A2P2O60397 106 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TNFSF13O75888 250 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 CAMPP49913 170 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 LOXL3P58215 753 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TAS2R45P59539 299 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 TAS2R60P59551 318 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 IL19Q9UHD0 177 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 SLC25A15Q9Y619 301 aa10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 ANKRD11Q6UB99 2663 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-201ENST00000325110 IGHG3P01860 377 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 ORM2P19652 201 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 C1orf162Q8NEQ5 155 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 ERHP84090 104 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 K7EN84 100 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 M0R143 59 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 LINC00869P0C866 280 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 GLRXP35754 106 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 MBNL2Q5VZF2 373 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF474Q6S9Z5 364 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 RAB1CQ92928 201 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 PLSCR4Q9NRQ2 329 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF586Q9NXT0 402 aa10.58□□□□□ -0.72
HMGCS1-201ENST00000325110 SAA1P0DJI8 122 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 Q8N7P7 452 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 NKX6-3A6NJ46 265 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF891A8MT65 544 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 PYYP10082 97 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 ZNF25P17030 456 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 FOXL1Q12952 345 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 HCP5Q6MZN7 132 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 RNASEH2CQ8TDP1 164 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 MRPL20Q9BYC9 149 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 POLR3KQ9Y2Y1 108 aaPredicted RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 DCHS1Q96JQ0 3298 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 hADV38S2A0JD32 116 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 SRIP30626 198 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 CASP6P55212 293 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 RPL15P61313 204 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 C17orf58Q2M2W7 97 aa10.57□□□□□ -0.72
HMGCS1-201ENST00000325110 DSCAMO60469 2012 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TNRC6BQ9UPQ9 1833 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TYMSP04818 313 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 CD99P14209 185 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 CDKN1AP38936 164 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 ZCCHC14Q8WYQ9 949 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 ADTRPQ96IZ2 230 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 TMEM68Q96MH6 324 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 DYNLRB1Q9NP97 96 aa10.56□□□□□ -0.72
HMGCS1-201ENST00000325110 SLC25A10Q9UBX3 287 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms