RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 RUNX1Q01196 453 aa10.34□□□□□ -0.75
CACNA1F-201ENST00000323022 PQLC2Q6ZP29 291 aa10.34□□□□□ -0.75
CACNA1F-201ENST00000323022 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
CACNA1F-201ENST00000323022 FOXC2Q99958 501 aa10.34□□□□□ -0.75
CACNA1F-201ENST00000323022 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 SMIM10L1P0DMW3 83 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 ICAM4Q14773 271 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 OR4D5Q8NGN0 318 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 SMIM10Q96HG1 83 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 F11RQ9Y624 299 aaKnown RBP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 EIF3GO75821 320 aaKnown RBP eCLIP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 PLP1P60201 277 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 C1orf122Q6ZSJ8 110 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 DEFB130BP0DP73 79 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 DEFB130AP0DP74 79 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 PSME4Q14997 1843 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
CACNA1F-201ENST00000323022 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 COL8A2P25067 703 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 Q6ZS92 163 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 LEPP41159 167 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 HSPB9Q9BQS6 159 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 REG4Q9BYZ8 158 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 TCF19Q9Y242 345 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 C8orf88P0DMB2 117 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 K7ERU9 68 aa10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 CMC4P56277 68 aaPredicted RBP10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
CACNA1F-201ENST00000323022 NANOS3P60323 173 aaKnown RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TXNDC17Q9BRA2 123 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TRBV5-3A0A0A0MS03 114 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 IGLV1-36A0A0B4J1U3 117 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 H3BRM9 83 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 J3QW42 95 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 CXCL2P19875 107 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TMEM136Q6ZRR5 245 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 CACNA1EQ15878 2313 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 IQCF6A8MYZ5 107 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 PAX8Q06710 450 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 ZNF146Q15072 292 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 VENTXO95231 258 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 MDKP21741 143 aaPredicted RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 UBE2V2Q15819 145 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 CYB561D1Q8N8Q1 229 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 SIRT4Q9Y6E7 314 aaPredicted RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 A0A0G2JMZ2 1700 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 LRRC37A2A6NM11 1700 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TRAV24A0A0B4J272 114 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 C1QCP02747 245 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 OTX1P32242 354 aaPredicted RBP10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 PRSS53Q2L4Q9 553 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 NR2C2APQ86WQ0 139 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 TMEM222Q9H0R3 208 aa10.31□□□□□ -0.76
CACNA1F-201ENST00000323022 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 POC1AQ8NBT0 407 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 PRDM13Q9H4Q3 707 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 KCNE5Q9UJ90 142 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 NDUFS8O00217 210 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 DUSP14O95147 198 aaKnown RBP10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 SPTBP11277 2137 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 IGHV3-73A0A0B4J1V6 119 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 CEACAM8P31997 349 aaPredicted RBP10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A10PA6NDY2 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A18PA6NE21 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A16PA6NEW6 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A20PA6NIJ5 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A8PA6NJQ4 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A22PA8MWA6 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A12PA8MX19 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A5PA8MXJ8 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
CACNA1F-201ENST00000323022 FAM90A15PP0C7V4 464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms