RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 OR10X1Q8NGY0 326 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 KAAG1Q9UBP8 84 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 DSPP15924 2871 aaKnown RBP18.18■□□□□ 0.5
PNKP-201ENST00000322344 A0A1W2PN81 502 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 C1QTNF9P0C862 333 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 FABP4P15090 132 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 CD69Q07108 199 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 OR4C13Q8NGP0 309 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 OR1P1Q8NH06 330 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 TMEM167AQ8TBQ9 72 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 CACNG8Q8WXS5 425 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 WFIKKN1Q96NZ8 548 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 DYNLRB1Q9NP97 96 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 TECRQ9NZ01 308 aaKnown RBP18.18■□□□□ 0.5
PNKP-201ENST00000322344 LY96Q9Y6Y9 160 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 DLL1O00548 723 aa18.17■□□□□ 0.5
PNKP-201ENST00000322344 GPX4P36969 197 aaPredicted RBP18.17■□□□□ 0.5
PNKP-201ENST00000322344 GAMTQ14353 236 aa18.17■□□□□ 0.5
PNKP-201ENST00000322344 SPACA3Q8IXA5 215 aa18.17■□□□□ 0.5
PNKP-201ENST00000322344 ZNF114Q8NC26 417 aa18.17■□□□□ 0.5
PNKP-201ENST00000322344 TRBV20OR9-2A0A075B6H5 130 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 C9JCJ5 164 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 CLEC12BQ2HXU8 276 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 MIR17HGQ75NE6 70 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 HIST1H2BLQ99880 126 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 FOXH1O75593 365 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 OR10J1P30954 320 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 LYPD2Q6UXB3 125 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 PACRGQ96M98 296 aaPredicted RBP18.16■□□□□ 0.5
PNKP-201ENST00000322344 PFDN5Q99471 154 aa18.16■□□□□ 0.5
PNKP-201ENST00000322344 A0A087X0M5 115 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 A0A1B0GX30 115 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 XKRY2A2RUG3 117 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 SHISA9B4DS77 424 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 IL3RAP26951 378 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 CHRNB4P30926 498 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 ZNF137PP52743 207 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 TAS2R45P59539 299 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 PQLC2Q6ZP29 291 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 AURKAIP1Q9NWT8 199 aaPredicted RBP18.15■□□□□ 0.5
PNKP-201ENST00000322344 WASHC3Q9Y3C0 194 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 DVL1O14640 695 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 OR5G3P0C626 314 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 LOXP28300 417 aaPredicted RBP18.15■□□□□ 0.5
PNKP-201ENST00000322344 PDLIM4P50479 330 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 OR10G8Q8NGN5 311 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 OCC1Q8TAD7 63 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 ST6GALNAC6Q969X2 333 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 CTSZQ9UBR2 303 aa18.15■□□□□ 0.5
PNKP-201ENST00000322344 PLCE1Q9P212 2302 aa18.14■□□□□ 0.5
PNKP-201ENST00000322344 IGKV1OR2-108A0A075B7D4 117 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 PGPEP1LA6NFU8 196 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 E7EQL1 145 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 ACTL6BO94805 426 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 DLX6P56179 175 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 MOB3BQ86TA1 216 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 OR10W1Q8NGF6 305 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 OR9G1Q8NH87 305 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 FAM122AQ96E09 287 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 CFAP47Q6ZTR5 3102 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 ZNF292O60281 2723 aa18.14■□□□□ 0.49
PNKP-201ENST00000322344 DMXL1Q9Y485 3027 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 REG1BP48304 166 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 PSG5Q15238 335 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 HLA-DRB5Q30154 266 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 TMEM155Q4W5P6 130 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 TEX38Q6PEX7 206 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 RNF2Q99496 336 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 TRAV9-1A0A075B6T8 112 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 A0A0U1RQK1 487 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 ZNF320A2RRD8 509 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 K7ENP7 123 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 MC5RP33032 325 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 DMRTC2Q8IXT2 367 aaPredicted RBP18.13■□□□□ 0.49
PNKP-201ENST00000322344 SGMS2Q8NHU3 365 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 VKORC1Q9BQB6 163 aa18.13■□□□□ 0.49
PNKP-201ENST00000322344 MRPL32Q9BYC8 188 aaKnown RBP18.13■□□□□ 0.49
PNKP-201ENST00000322344 CUL9Q8IWT3 2517 aa18.12■□□□□ 0.49
PNKP-201ENST00000322344 HIST1H1BP16401 226 aaKnown RBP18.12■□□□□ 0.49
PNKP-201ENST00000322344 APOBEC3AP31941 199 aaPredicted RBP18.12■□□□□ 0.49
PNKP-201ENST00000322344 SUB1P53999 127 aaKnown RBP eCLIP18.12■□□□□ 0.49
PNKP-201ENST00000322344 RNASEH2CQ8TDP1 164 aaKnown RBP18.12■□□□□ 0.49
PNKP-201ENST00000322344 RPL15P61313 204 aaKnown RBP18.11■□□□□ 0.49
PNKP-201ENST00000322344 SSX2Q16385 188 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 TGIF2LXQ8IUE1 241 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 TMEM37Q8WXS4 190 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 ASPMQ8IZT6 3477 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 YLPM1P49750 1951 aaKnown RBP18.11■□□□□ 0.49
PNKP-201ENST00000322344 TRBV23-1A0A0A0MS06 115 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 B9A039 149 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 FOXC1Q12948 553 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 VMA21Q3ZAQ7 101 aa18.11■□□□□ 0.49
PNKP-201ENST00000322344 PRR30Q53SZ7 412 aaPredicted RBP18.11■□□□□ 0.49
PNKP-201ENST00000322344 IGHV1-69-2A0A0G2JMI3 117 aa18.1■□□□□ 0.49
PNKP-201ENST00000322344 IGLV2-23P01705 113 aa18.1■□□□□ 0.49
PNKP-201ENST00000322344 CD3EP07766 207 aa18.1■□□□□ 0.49
PNKP-201ENST00000322344 C8orf88P0DMB2 117 aa18.1■□□□□ 0.49
PNKP-201ENST00000322344 IGHV1-8P0DP01 117 aa18.1■□□□□ 0.49
PNKP-201ENST00000322344 EAF1Q96JC9 268 aaPredicted RBP18.1■□□□□ 0.49
PNKP-201ENST00000322344 TRAPPC1Q9Y5R8 145 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms