RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MBNL2Q5VZF2 373 aaKnown RBP12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 CCL13Q99616 98 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 PROP1O75360 226 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 HYPMO75409 117 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 CLDN14O95500 239 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 TMEM11P17152 192 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 TIMP3P35625 211 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 IER3P46695 156 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
SHROOM1-201ENST00000319854 SCO2A0A1W2PP80 73 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 NKX6-3A6NJ46 265 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 CEACAM4O75871 244 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 GPX1P07203 203 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 FOXC1Q12948 553 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 Q6ZS92 163 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 C1orf174Q8IYL3 243 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 SRRM5B3KS81 715 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 LEMD1Q68G75 181 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 GNB4Q9HAV0 340 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 TUBG2Q9NRH3 451 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 LAMTOR2Q9Y2Q5 125 aa12.8□□□□□ -0.36
SHROOM1-201ENST00000319854 TRAV3A0A0B4J244 114 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 K7EN84 100 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 FCN1O00602 326 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 PDE6DO43924 150 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 OR9G9P0C7N8 305 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 KIAA1644Q3SXP7 199 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 TIMM23BQ5SRD1 257 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 PRAMEF5Q5TYX0 476 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 Q6ZN92 141 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 OR10G8Q8NGN5 311 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 WNT10AQ9GZT5 417 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 TBL2Q9Y4P3 447 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 SPINK4O60575 86 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 TNFAIP6P98066 277 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 OR10P1Q8NGE3 313 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
SHROOM1-201ENST00000319854 HINT1P49773 126 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 MORN2Q502X0 79 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 OR4B1Q8NGF8 309 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 TXN2Q99757 166 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 RRHO14718 337 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 MYOD1P15172 320 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 RNF2Q99496 336 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 MAP1AP78559 2803 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 PLXNB1O43157 2135 aa12.78□□□□□ -0.36
SHROOM1-201ENST00000319854 SNURFLB1AK76 121 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 GLRXP35754 106 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 SELENOVP59797 346 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 PRR7Q8TB68 274 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 KCNIP2Q9NS61 270 aa12.77□□□□□ -0.36
SHROOM1-201ENST00000319854 ATP6V1FQ16864 119 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 ST6GALNAC3Q8NDV1 305 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 MGST3O14880 152 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 Q0VG73 95 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 ORAOV1Q8WV07 137 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 GCM1Q9NP62 436 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 CALYQ9NYX4 217 aa12.77□□□□□ -0.37
SHROOM1-201ENST00000319854 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 PMCHP20382 165 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 ABHD12Q8N2K0 398 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 OR4A16Q8NH70 328 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 GAL3ST2Q9H3Q3 398 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 UQCR10Q9UDW1 63 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 FAM90A26D6RGX4 464 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 MMP23AO75900 390 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 CD40P25942 277 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 LGALS4P56470 323 aa12.76□□□□□ -0.37
SHROOM1-201ENST00000319854 A8MXE2 369 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 IGHV1-46P01743 117 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 AMTP48728 403 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 SLC35B1P78383 322 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 UBE2V1Q13404 147 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
SHROOM1-201ENST00000319854 ERASQ7Z444 233 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms