RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 ITPR3Q14573 2671 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 JMJD1CQ15652 2540 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 LOC102725191A0A1B0GVB3 256 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 C7orf71A4D174 169 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 LYZL6O75951 148 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 CDAP32320 146 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SSTR5P35346 364 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SLAQ13239 276 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 SPANXN5Q5MJ07 72 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF818PQ6ZRF7 136 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 GAPTQ8N292 157 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 PEF1Q9UBV8 284 aaKnown RBP7.81□□□□□ -1.16
CAPN3-201ENST00000318023 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
CAPN3-201ENST00000318023 NAV3Q8IVL0 2385 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 TRAV36DV7A0A075B6V5 113 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 A0A1W2PQD3 144 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 VDAC1P21796 283 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 NPY1RP25929 384 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 TIMP3P35625 211 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 RPL24P83731 157 aaKnown RBP7.8□□□□□ -1.16
CAPN3-201ENST00000318023 PMCHL1Q16048 86 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 EBLN2Q6P2I7 272 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 C22orf34Q6ZV56 151 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 KIR3DL3Q8N743 410 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 OR2AE1Q8NHA4 323 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 TAF15Q92804 592 aaKnown RBP eCLIP7.8□□□□□ -1.16
CAPN3-201ENST00000318023 SLC7A10Q9NS82 523 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 EXPH5Q8NEV8 1989 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 H0YJW9 148 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 RER1O15258 196 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 KIR2DL2P43627 348 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-201ENST00000318023 TCL1AP56279 114 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 SRSF7Q16629 238 aaKnown RBP eCLIP7.8□□□□□ -1.16
CAPN3-201ENST00000318023 PIGYQ3MUY2 71 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 PRR31Q5SQ13 230 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 WDR82Q6UXN9 313 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 Q6ZPA2 131 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 OR2Z1Q8NG97 314 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 PSENENQ9NZ42 101 aa7.8□□□□□ -1.16
CAPN3-201ENST00000318023 ZFHX3Q15911 3703 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 NCOA6Q14686 2063 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 CTXND1A0A1B0GTU2 59 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 SNAI2O43623 268 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 IFI6P09912 130 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 FOXG1P55316 489 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 PLP1P60201 277 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 HTD2P86397 168 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 PSG7Q13046 419 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 RNF138Q8WVD3 245 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 Q96M66 194 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 CHODLQ9H9P2 273 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 CLCF1Q9UBD9 225 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 LRP5LA4QPB2 252 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 GUCA1AP43080 201 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 FOXE3Q13461 319 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF474Q6S9Z5 364 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 Q6ZRM9 215 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 OR4P4Q8NGL7 312 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 OR51H1Q8NH63 302 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 OCC1Q8TAD7 63 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 PROCRQ9UNN8 238 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 OR51B2Q9Y5P1 312 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 MEF2CQ06413 473 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF788Q6ZQV5 615 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 ZNF439Q8NDP4 499 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 FAM222BQ8WU58 562 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 SIGMAR1Q99720 223 aa7.79□□□□□ -1.16
CAPN3-201ENST00000318023 MRPL13Q9BYD1 178 aaKnown RBP7.79□□□□□ -1.16
CAPN3-201ENST00000318023 IGKV1D-13A0A0B4J2D9 117 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 IGKV1-13P0DP09 117 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 CEACAM21Q3KPI0 293 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 ASCL4Q6XD76 172 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MCRIP2Q9BUT9 160 aaKnown RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 IL36BQ9NZH7 164 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 CACNG5Q9UF02 275 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 IGLV3-32A0A0A0MS00 114 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MBD3L4A6NDZ8 208 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MBD3L3A6NE82 208 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MBD3L5A6NJ08 208 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-201ENST00000318023 NTF4P34130 210 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 LGALS4P56470 323 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 HBG1P69891 147 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 HBG2P69892 147 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 UFSP1Q6NVU6 142 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 C19orf35Q6ZS72 473 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 FAM214BQ7L5A3 538 aa7.78□□□□□ -1.16
CAPN3-201ENST00000318023 MBD3L2Q8NHZ7 208 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms