RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 C1QAP02745 245 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 GPR183P32249 361 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 PLA2G2FQ9BZM2 168 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 C1QL1O75973 258 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 PLXNA2O75051 1894 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 SEC11AP67812 179 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 NRN1LQ496H8 165 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 TIMM23BQ5SRD1 257 aa13.2□□□□□ -0.3
HCFC1-201ENST00000310441 TRGV3P03979 118 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 FER1L6-AS1Q8NA97 138 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 VGLL1Q99990 258 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 SPANXDQ9BXN6 97 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 MED12LQ86YW9 2145 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 DPM2O94777 84 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 IL6RP08887 468 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 KLF14Q8TD94 323 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 IGHV1-69-2A0A0G2JMI3 117 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 HYAL3O43820 417 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF385AQ96PM9 386 aaKnown RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 TANC2Q9HCD6 1990 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 PRSS12P56730 875 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 FBLIM1Q8WUP2 373 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 F2Z2F3 143 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 TRAV24A0A0B4J272 114 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
HCFC1-201ENST00000310441 CHCHD1Q96BP2 118 aaKnown RBP13.19□□□□□ -0.3
HCFC1-201ENST00000310441 TRBV5-7A0A0A0MS05 114 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 A0A1W2PPV9 198 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 ZG16O60844 167 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 LHX8Q68G74 356 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 GDF15Q99988 308 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 SMPXQ9UHP9 88 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 TMEM187Q14656 261 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF257Q9Y2Q1 563 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
HCFC1-201ENST00000310441 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 RLFQ13129 1914 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 HRKO00198 91 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 NDUFA3O95167 84 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 REG1AP05451 166 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
HCFC1-201ENST00000310441 YBX2Q9Y2T7 364 aaKnown RBP13.18□□□□□ -0.3
HCFC1-201ENST00000310441 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
HCFC1-201ENST00000310441 ICAM4Q14773 271 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 C9JCJ5 164 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 CKS1BP61024 79 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 TRGV2A0A075B6R0 118 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF818PQ6ZRF7 136 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 ST20Q9HBF5 79 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 CD200R1LQ6Q8B3 271 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 ZNF784Q8NCA9 323 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-201ENST00000310441 C1orf162Q8NEQ5 155 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-201ENST00000310441 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 NAPSAO96009 420 aa13.17□□□□□ -0.3
HCFC1-201ENST00000310441 CD5P06127 495 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 LHFPL6Q9Y693 200 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 A8MWV9 139 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 TOMM7Q9P0U1 55 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 ERVK11-1P61568 191 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 Q6ZT83 130 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 OR5P3Q8WZ94 311 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 CCL4P13236 92 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 ATP5L2Q7Z4Y8 100 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 NEU4Q8WWR8 484 aaPredicted RBP13.16□□□□□ -0.3
HCFC1-201ENST00000310441 GNB1LQ9BYB4 327 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
HCFC1-201ENST00000310441 CMC4P56277 68 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-201ENST00000310441 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 H2BFSP57053 126 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 ZIC4Q8N9L1 334 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 HBDP02042 147 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-201ENST00000310441 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-201ENST00000310441 C14orf144Q96I85 54 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 A0A0J9YW62 118 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 HAX1O00165 279 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 RNASE4P34096 147 aaKnown RBP13.15□□□□□ -0.3
HCFC1-201ENST00000310441 EFNB1P98172 346 aa13.15□□□□□ -0.3
HCFC1-201ENST00000310441 KIAA1644Q3SXP7 199 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms