RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 VENTXO95231 258 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 APCSP02743 223 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 PF4V1P10720 104 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 ZNF343Q6P1L6 599 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRO3102Q9H379 93 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 OTOGLQ3ZCN5 2332 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 CGAP01215 116 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 GATA2P23769 480 aaPredicted RBP9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 LOXL3P58215 753 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 CCL19Q99731 98 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 CUL9Q8IWT3 2517 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 TMEM178BH3BS89 294 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 TNFSF13O75888 250 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 CCL20P78556 96 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.89
PCDHGC3-201ENST00000308177 KIAA1549LQ6ZVL6 1849 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 MT-ND6P03923 174 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 NHLRC2Q8NBF2 726 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 MSRB2Q9Y3D2 182 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 IGHV3OR16-10A0A075B7F0 116 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 WIPF3A6NGB9 483 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 IL4P05112 153 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 ZNF137PP52743 207 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 SMUG1Q53HV7 270 aa9.46□□□□□ -0.9
PCDHGC3-201ENST00000308177 FREM1Q5H8C1 2179 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 ICAM4Q14773 271 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 ADIPOQQ15848 244 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 SGK494Q96LW2 274 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 M0R2Z0 102 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 LYL1P12980 280 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 CD81P60033 236 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 LINC00473A8K010 186 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 J3KRW8 73 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 ATP5G3P48201 142 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 SFRP2Q96HF1 295 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 METTL26Q96S19 204 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 PLCE1Q9P212 2302 aa9.45□□□□□ -0.9
PCDHGC3-201ENST00000308177 CENPFP49454 3210 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 IGHV3-35A0A0C4DH35 117 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 K7ENP7 123 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 LY6EQ16553 131 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 TRAV20A0A0B4J274 112 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 THBDP07204 575 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 LIME1Q9H400 295 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 CRIM1Q9NZV1 1036 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 NCOA6Q14686 2063 aaPredicted RBP9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 Q6ZRM9 215 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 PPP1R27Q86WC6 154 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 YTHDF2Q9Y5A9 579 aaKnown RBP9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 CD5P06127 495 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 LMO1P25800 156 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 HOXA4Q00056 320 aaPredicted RBP9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 Q6ZR03 302 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 SDF2L1Q9HCN8 221 aa9.44□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR2J3O76001 311 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 VSIRQ9H7M9 311 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 BET1LQ9NYM9 111 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 F5H697 171 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 WT1P19544 449 aaPredicted RBP9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 LINC00205P59089 165 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 SRSF12Q8WXF0 261 aaKnown RBP9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 TNFRSF14Q92956 283 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 FAM122AQ96E09 287 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 CD69Q07108 199 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 CHODLQ9H9P2 273 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 SCO2A0A1W2PP80 73 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 CA7P43166 264 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM177Q53S58 311 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 PRR30Q53SZ7 412 aaPredicted RBP9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 FAM168AQ92567 244 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 S4R3C0 116 aa9.43□□□□□ -0.9
PCDHGC3-201ENST00000308177 NBR2O15453 112 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 NBL1P41271 181 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 ERVK11-1P61568 191 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms