RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SSX3Q99909 188 aa13.96□□□□□ -0.17
KRT28-201ENST00000306658 ITPR3Q14573 2671 aa13.96□□□□□ -0.18
KRT28-201ENST00000306658 RPS10-NUDT3A0A1W2PQS6 291 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 IGLC7A0M8Q6 106 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 ATP6V0CP27449 155 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 DLK1P80370 383 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 FXYD3Q14802 87 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 VWC2Q2TAL6 325 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 TUSC1Q2TAM9 212 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 RASL11BQ9BPW5 248 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 WDR61Q9GZS3 305 aaKnown RBP13.95□□□□□ -0.18
KRT28-201ENST00000306658 ZANQ9Y493 2812 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 UBE2L5PA0A1B0GUS4 154 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 SSBP2P81877 361 aaPredicted RBP13.95□□□□□ -0.18
KRT28-201ENST00000306658 AANATQ16613 207 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 Q8N9W7 124 aa13.95□□□□□ -0.18
KRT28-201ENST00000306658 NMBP08949 121 aa13.94□□□□□ -0.18
KRT28-201ENST00000306658 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
KRT28-201ENST00000306658 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
KRT28-201ENST00000306658 PCNPQ8WW12 178 aaKnown RBP13.94□□□□□ -0.18
KRT28-201ENST00000306658 TAF15Q92804 592 aaKnown RBP eCLIP13.94□□□□□ -0.18
KRT28-201ENST00000306658 SH3BGRL3Q9H299 93 aa13.94□□□□□ -0.18
KRT28-201ENST00000306658 TEX22C9J3V5 150 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 SMAD7O15105 426 aaKnown RBP13.93□□□□□ -0.18
KRT28-201ENST00000306658 FAM157CP0CG43 387 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 SULT1A2P50226 295 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 CX3CL1P78423 397 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 PIFOQ8TCI5 191 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 SSMEM1Q8WWF3 244 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 RBM14Q96PK6 669 aaKnown RBP13.93□□□□□ -0.18
KRT28-201ENST00000306658 P2RX4Q99571 388 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 SVEP1Q4LDE5 3571 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 NAV3Q8IVL0 2385 aa13.93□□□□□ -0.18
KRT28-201ENST00000306658 SMCO3A2RU48 225 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 FNDC10F2Z333 226 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 FGF16O43320 207 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 FSHBP01225 129 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 HLA-DRB1P01911 266 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 AREGP15514 252 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 RAB5CP51148 216 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 RUNX1Q01196 453 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 TEX29Q8N6K0 151 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 RNASEH2CQ8TDP1 164 aaKnown RBP13.92□□□□□ -0.18
KRT28-201ENST00000306658 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 SLC25A33Q9BSK2 321 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 SOX21Q9Y651 276 aaPredicted RBP13.92□□□□□ -0.18
KRT28-201ENST00000306658 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
KRT28-201ENST00000306658 UMAD1C9J7I0 102 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 REG1AP05451 166 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 FGF7P21781 194 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 CACNG8Q8WXS5 425 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 PSMG3Q9BT73 122 aaPredicted RBP13.91□□□□□ -0.18
KRT28-201ENST00000306658 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 TEX15Q9BXT5 2789 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 ZNF705EA8MWA4 302 aaPredicted RBP13.91□□□□□ -0.18
KRT28-201ENST00000306658 H3BUX3 64 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 MPDU1O75352 247 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 APELAP0DMC3 54 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 GPX4P36969 197 aaPredicted RBP13.91□□□□□ -0.18
KRT28-201ENST00000306658 C9orf139Q6ZV77 190 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 SLC7A5P1Q8MH63 180 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 ZNF709Q8N972 641 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 SAT2Q96F10 170 aaPredicted RBP13.91□□□□□ -0.18
KRT28-201ENST00000306658 WDR83OSQ9Y284 106 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 TIMM9Q9Y5J7 89 aa13.91□□□□□ -0.18
KRT28-201ENST00000306658 CELSR1Q9NYQ6 3014 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 LINC00862A6NCI5 91 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 C17orf112F2Z3M2 114 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 TRIM77I1YAP6 450 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 CORTO00230 105 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
KRT28-201ENST00000306658 BLOC1S1P78537 153 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 SERF2P84101 59 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 CD69Q07108 199 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 BTNL8Q6UX41 500 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 TREML4Q6UXN2 200 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 TMEM182Q6ZP80 229 aaPredicted RBP13.9□□□□□ -0.18
KRT28-201ENST00000306658 RSG1Q9BU20 258 aa13.9□□□□□ -0.18
KRT28-201ENST00000306658 F11RQ9Y624 299 aaKnown RBP13.9□□□□□ -0.18
KRT28-201ENST00000306658 IGHV7-81A0A0B4J1V7 117 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 PRH1P02810 166 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 DEFB112Q30KQ8 113 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 ARSJQ5FYB0 599 aaPredicted RBP13.89□□□□□ -0.19
KRT28-201ENST00000306658 AKR1C8PQ5T2L2 129 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 PVRIGQ6DKI7 326 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 CENPVQ7Z7K6 275 aaPredicted RBP13.89□□□□□ -0.19
KRT28-201ENST00000306658 TMEM219Q86XT9 240 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 C5orf56Q8N8D9 126 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 OR1L6Q8NGR2 347 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 PLA2G2EQ9NZK7 142 aa13.89□□□□□ -0.19
KRT28-201ENST00000306658 FLNAP21333 2647 aaKnown RBP13.89□□□□□ -0.19
KRT28-201ENST00000306658 A6NDX4 124 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 M0QZK8 103 aa13.88□□□□□ -0.19
KRT28-201ENST00000306658 TSPAN9O75954 239 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms