RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZC4H2Q9NQZ6 224 aa20.01■□□□□ 0.79
CDKN2A-201ENST00000304494 C19orf73Q9NVV2 129 aa20.01■□□□□ 0.79
CDKN2A-201ENST00000304494 DISC1C4P0D8 188 aa20■□□□□ 0.79
CDKN2A-201ENST00000304494 B3GALNT1O75752 331 aa20■□□□□ 0.79
CDKN2A-201ENST00000304494 MARCH1Q8TCQ1 289 aa20■□□□□ 0.79
CDKN2A-201ENST00000304494 SLIRPQ9GZT3 109 aaKnown RBP20■□□□□ 0.79
CDKN2A-201ENST00000304494 RSL24D1Q9UHA3 163 aaKnown RBP20■□□□□ 0.79
CDKN2A-201ENST00000304494 TGOLN2O43493 480 aa19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 CTSDP07339 412 aaPredicted RBP19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 MFAP2P55001 183 aa19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 PRCDQ00LT1 54 aa19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 OR1P1Q8NH06 330 aa19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 BSCL2Q96G97 398 aaPredicted RBP19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 C21orf62Q9NYP8 219 aa19.99■□□□□ 0.79
CDKN2A-201ENST00000304494 TMEM213A2RRL7 107 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 AKAIN1P0CW23 69 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 EDN2P20800 178 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 AKR1C2P52895 323 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 HSPE1P61604 102 aaKnown RBP19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 TRIM16LQ309B1 348 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 SPSB3Q6PJ21 355 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 SLC2A8Q9NY64 477 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 C14orf166Q9Y224 244 aaKnown RBP19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 UFC1Q9Y3C8 167 aa19.98■□□□□ 0.79
CDKN2A-201ENST00000304494 OR2T8A6NH00 312 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 GSTZ1O43708 216 aaPredicted RBP19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 SURF2Q15527 256 aaPredicted RBP19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 FAAP20Q6NZ36 180 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 OR2C3Q8N628 320 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 SCARB1Q8WTV0 552 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 MARC2Q969Z3 335 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 RCHY1Q96PM5 261 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 ZNF436Q9C0F3 470 aaPredicted RBP19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 TUBA4BQ9H853 241 aa19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 HUWE1Q7Z6Z7 4374 aaKnown RBP19.97■□□□□ 0.79
CDKN2A-201ENST00000304494 ZNF785A8K8V0 405 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 IGKV1-5P01602 117 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 ELLP55199 621 aaPredicted RBP19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 CD81P60033 236 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 ZNF57Q68EA5 555 aaPredicted RBP19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 UNQ9165/PRO28630Q6UXU0 137 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 UXS1Q8NBZ7 420 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 ZNF114Q8NC26 417 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 OR4C16Q8NGL9 310 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 MCFD2Q8NI22 146 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 CACNG8Q8WXS5 425 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 PRRT1Q99946 306 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 PLEKHA3Q9HB20 300 aa19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 GAR1Q9NY12 217 aaKnown RBP19.96■□□□□ 0.79
CDKN2A-201ENST00000304494 K7EIM0 57 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 UCP1P25874 307 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 ERHP84090 104 aaKnown RBP19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 GUCA2BQ16661 112 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 SP6Q3SY56 376 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 RRNAD1Q96FB5 475 aaKnown RBP19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 NEURL2Q9BR09 285 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 CEPT1Q9Y6K0 416 aa19.95■□□□□ 0.78
CDKN2A-201ENST00000304494 IGHV3-21A0A0B4J1V1 117 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 IGHV3-35A0A0C4DH35 117 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 ANKRD20A5PA0PJZ0 165 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 FABP12A6NFH5 140 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 P0C879 139 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 TNFSF8P32971 234 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 TM4SF20Q53R12 229 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 UBAC2Q8NBM4 344 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 MISP3Q96FF7 219 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 TM2D3Q9BRN9 247 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 PDCD10Q9BUL8 212 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 NXF2Q9GZY0 626 aaKnown RBP19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 MRPL27Q9P0M9 148 aaKnown RBP19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 MLXQ9UH92 298 aa19.94■□□□□ 0.78
CDKN2A-201ENST00000304494 IZUMO4Q1ZYL8 232 aa19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 Q56UQ5 140 aa19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 RNASE11Q8TAA1 199 aaKnown RBP19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 TMEM190Q8WZ59 177 aa19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 WDR89Q96FK6 387 aaPredicted RBP19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 RTBDNQ9BSG5 229 aaPredicted RBP19.93■□□□□ 0.78
CDKN2A-201ENST00000304494 A0A0B4J293 547 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 TEX13DA0A0J9YY54 714 aaPredicted RBP19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 IFNA17P01571 189 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 C8orf88P0DMB2 117 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 SLC35G3Q8N808 338 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 SOSTQ9BQB4 213 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 TMEM222Q9H0R3 208 aa19.92■□□□□ 0.78
CDKN2A-201ENST00000304494 CCDC160A6NGH7 325 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 F8W735 103 aaPredicted RBP19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 NDUFA4O00483 81 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 BTNL8Q6UX41 500 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 TMEM61Q8N0U2 210 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 OR51S1Q8NGJ8 323 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 TXN2Q99757 166 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 C5orf66Q9H5L9 145 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 NAA60Q9H7X0 242 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 DAZ1Q9NQZ3 744 aaKnown RBP19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 SCP2D1Q9UJQ7 156 aa19.91■□□□□ 0.78
CDKN2A-201ENST00000304494 INS-IGF2F8WCM5 200 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 I3L2K1 104 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 ST8SIA3O43173 380 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 CDS2O95674 445 aa19.9■□□□□ 0.78
CDKN2A-201ENST00000304494 CD7P09564 240 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms