RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 A0A087WX48 190 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 GFRA3O60609 400 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 ITGBL1O95965 494 aaPredicted RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 INSP01308 110 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 Q9H3A6 140 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 GAGE2BQ13066 116 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 TMEM155Q4W5P6 130 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 GTSCR1Q86UQ5 136 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 CHTOPQ9Y3Y2 248 aaKnown RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 CENPVL1A0A0U1RR11 272 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 IZUMO1RA6ND01 250 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 PAX4O43316 350 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 DUSP14O95147 198 aaKnown RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 VDAC2P45880 294 aaPredicted RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 CRYBA2P53672 197 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 RIPPLY3P57055 190 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 PPP1R3EQ9H7J1 279 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 GREB1LQ9C091 1923 aaPredicted RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 A0A1W2PPV9 198 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 EGR4Q05215 589 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 NRN1LQ496H8 165 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 TIMM23BQ5SRD1 257 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 C1orf100Q5SVJ3 147 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 FAM168AQ92567 244 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 ASCL2Q99929 193 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 ANAPC10Q9UM13 185 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 DOCK5Q9H7D0 1870 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 DOCK1Q14185 1865 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 Q96M66 194 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
CLIP1-201ENST00000302528 ERG28Q9UKR5 140 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 PCM1Q15154 2024 aa8.79□□□□□ -1
CLIP1-201ENST00000302528 KIAA0100Q14667 2235 aaKnown RBP8.78□□□□□ -1
CLIP1-201ENST00000302528 FBLN7Q53RD9 439 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 AMELYQ99218 206 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
CLIP1-201ENST00000302528 COX5BP10606 129 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 C1QTNF12Q5T7M4 302 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 HIGD1CA8MV81 97 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 FUT5Q11128 374 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 LTBRP36941 435 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 COX11Q9Y6N1 276 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 NPC2P61916 151 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 TFF3Q07654 80 aa8.78□□□□□ -1
CLIP1-201ENST00000302528 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 ZFAND6Q6FIF0 208 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 ASCL4Q6XD76 172 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 MGST2Q99735 147 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 LHFPL6Q9Y693 200 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 C8orf46Q8TAG6 207 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 ZNF479Q96JC4 524 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 EFNB1P98172 346 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 PRTN3P24158 256 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 PEBP1P30086 187 aaKnown RBP8.77□□□□□ -1.01
CLIP1-201ENST00000302528 OCIAD2Q56VL3 154 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 POC1AQ8NBT0 407 aa8.77□□□□□ -1.01
CLIP1-201ENST00000302528 NEU4Q8WWR8 484 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-201ENST00000302528 ATP5G3P48201 142 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 PRADC1Q9BSG0 188 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 HS3ST3B1Q9Y662 390 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 XIRP1Q702N8 1843 aaKnown RBP8.76□□□□□ -1.01
CLIP1-201ENST00000302528 TTC3P53804 2025 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 ZNF318Q5VUA4 2279 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 LRRC37AA6NMS7 1700 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 IGLV1-36A0A0B4J1U3 117 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 TGIF1Q15583 401 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-201ENST00000302528 COLCA1Q6ZS62 124 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 MIR17HGQ75NE6 70 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 TRAV9-1A0A075B6T8 112 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 IGKCP01834 107 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 CCL1P22362 96 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 RIPPLY2Q5TAB7 128 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 CDCP2Q5VXM1 449 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 OR5P3Q8WZ94 311 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 PRSS22Q9GZN4 317 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 NRN1Q9NPD7 142 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 PILRBQ9UKJ0 227 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 LURAP1LQ8IV03 231 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 TM4SF5O14894 197 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 GZMBP10144 247 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 NSUN5P1Q3KNT7 163 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 ZIC4Q8N9L1 334 aa8.76□□□□□ -1.01
CLIP1-201ENST00000302528 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 MSGN1A6NI15 193 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 LINC00587B1AMM8 73 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-201ENST00000302528 TCRBV4S1A1TA0A5B7 111 aa8.75□□□□□ -1.01
CLIP1-201ENST00000302528 MPTX1A8MV57 137 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms