RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CD300CQ08708 224 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 ECSCRQ19T08 205 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 RNF152Q8N8N0 203 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 ZNF114Q8NC26 417 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 FAM110DQ8TAY7 271 aaPredicted RBP7.4□□□□□ -1.22
RFX3-201ENST00000302303 DTD1Q8TEA8 209 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 HINT2Q9BX68 163 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 OR5AC2Q9NZP5 309 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 IGLV11-55A0A075B6I3 123 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 A0A1W2PN81 502 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 C15orf62A8K5M9 175 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 PRSS46E5RG02 174 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 WRBO00258 174 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 MPC2O95563 127 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 GIPP09681 153 aaPredicted RBP7.39□□□□□ -1.23
RFX3-201ENST00000302303 IAPPP10997 89 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 LYL1P12980 280 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 CHRNA7P36544 502 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
RFX3-201ENST00000302303 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 OR4F5Q8NH21 305 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 MYOZ3Q8TDC0 251 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 SMIM8Q96KF7 97 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 TMEM68Q96MH6 324 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 NEURL2Q9BR09 285 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 PLEKHA3Q9HB20 300 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 RANGRFQ9HD47 186 aaPredicted RBP7.39□□□□□ -1.23
RFX3-201ENST00000302303 RNF114Q9Y508 228 aa7.39□□□□□ -1.23
RFX3-201ENST00000302303 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
RFX3-201ENST00000302303 CEBPZOSA8MTT3 80 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 SSSCA1O60232 199 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 DEDDO75618 318 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 CYCSP99999 105 aaKnown RBP7.38□□□□□ -1.23
RFX3-201ENST00000302303 CD83Q01151 205 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 DEFA5Q01523 94 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 TMEM267Q0VDI3 215 aaPredicted RBP7.38□□□□□ -1.23
RFX3-201ENST00000302303 MLANAQ16655 118 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 OXLD1Q5BKU9 147 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 HSD17B13Q7Z5P4 300 aaPredicted RBP7.38□□□□□ -1.23
RFX3-201ENST00000302303 HAPLN4Q86UW8 402 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 KLHDC1Q8N7A1 406 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 ABHD5Q8WTS1 349 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 PDCD10Q9BUL8 212 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 C19orf24Q9BVV8 132 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 CACFD1Q9UGQ2 172 aa7.38□□□□□ -1.23
RFX3-201ENST00000302303 PSMB11A5LHX3 300 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 SMLR1H3BR10 107 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 CCNKO75909 580 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 HOXA1P49639 335 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 TAS2R30P59541 319 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 RAP2BP61225 183 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 C2orf83Q53S99 150 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 TMEM14EPQ6UXP3 125 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 CENPVQ7Z7K6 275 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 OR5AU1Q8NGC0 362 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 OR11H4Q8NGC9 324 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 OR1P1Q8NH06 330 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 ZNF414Q96IQ9 312 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 FNDC4Q9H6D8 234 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 HEYLQ9NQ87 328 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 LSM5Q9Y4Y9 91 aaKnown RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 F8W735 103 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 H3BP45 60 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 I3L2K1 104 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 K7EIM0 57 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 MED6O75586 246 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 NDUFB8O95169 186 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 RPLP1P05386 114 aaKnown RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 CD28P10747 220 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 HTR2BP41595 481 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 RAB9AP51151 201 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 ERHP84090 104 aaKnown RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 FOXE3Q13461 319 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 LINC01559Q495D7 138 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 PRSS54Q6PEW0 395 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 SLC24A4Q8NFF2 622 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 WFDC12Q8WWY7 111 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 ASB13Q8WXK3 278 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 BSCL2Q96G97 398 aaPredicted RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 MS4A10Q96PG2 267 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 RAB40CQ96S21 281 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 MDFIQ99750 246 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
RFX3-201ENST00000302303 U3KQ87 197 aa7.37□□□□□ -1.23
RFX3-201ENST00000302303 IGSF23A1L1A6 192 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 FAM24AA6NFZ4 105 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 H3BUA1 57 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 TSC22D2O75157 780 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 ELANEP08246 267 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 SLC25A4P12235 298 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 NPY1RP25929 384 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 S100A10P60903 97 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms